Evidence map›Paper›PMID 34857787›Full record

ArticleScientific reports2021

Circular functional analysis of OCT data for precise identification of structural phenotypes in the eye.

Md Hasnat Ali, Brian Wainwright, Alexander Petersen, Ganesh B Jonnadula, Meghana Desai, Harsha L Rao, M B Srinivas, S Rao Jammalamadaka, Sirisha Senthil, Saumyadipta Pyne

Open access · greenAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 2 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 3 countries.

Md Hasnat AliL. V. Prasad Eye Institute, Hyderabad, Telangana, India. hasali4u@gmail.com.
Brian WainwrightDepartment of Statistics and Applied Probability, University of California, Santa Barbara, CA, USA.
Alexander PetersenDepartment of Statistics and Applied Probability, University of California, Santa Barbara, CA, USA.ORCID http://orcid.org/0000-0002-8184-5739
Ganesh B JonnadulaL. V. Prasad Eye Institute, Hyderabad, Telangana, India.ORCID http://orcid.org/0000-0002-2076-6957
Meghana DesaiHealth Analytics Network, Pittsburgh, PA, USA.
Harsha L RaoNarayana Nethralaya, Bengaluru, Karnataka, India.ORCID http://orcid.org/0000-0001-5866-9856
M B SrinivasEEE Department, BITS Pilani, Hyderabad Campus, Hyderabad, Telangana, India.
S Rao JammalamadakaDepartment of Statistics and Applied Probability, University of California, Santa Barbara, CA, USA.
Sirisha SenthilL. V. Prasad Eye Institute, Hyderabad, Telangana, India.
Saumyadipta PyneDepartment of Statistics and Applied Probability, University of California, Santa Barbara, CA, USA. spyne@ucsb.edu.
L V Prasad Eye Institute · INUniversity of California, Santa Barbara · USBirla Institute of Technology and Science - Hyderabad Campus · INBrigham Young University · USMaastricht University · NLUniversity of Pittsburgh · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Progressive optic neuropathies such as glaucoma are major causes of blindness globally. Multiple sources of subjectivity and analytical challenges are often encountered by clinicians in the process of early diagnosis and clinical management of these diseases. In glaucoma, the structural damage is often characterized by neuroretinal rim (NRR) thinning of the optic nerve head, and other clinical parameters. Baseline structural heterogeneity in the eyes can play a key role in the progression of optic neuropathies, and present challenges to clinical decision-making. We generated a dataset of Optical Coherence Tomography (OCT) based high-resolution circular measurements on NRR phenotypes, along with other clinical covariates, of 3973 healthy eyes as part of an established clinical cohort of Asian Indian participants. We introduced CIFU, a new computational pipeline for CIrcular FUnctional data modeling and analysis. We demonstrated CIFU by unsupervised circular functional clustering of the OCT NRR data, followed by meta-clustering to characterize the clusters using clinical covariates, and presented a circular visualization of the results. Upon stratification by age, we identified a healthy NRR phenotype cluster in the age group 40-49 years with predictive potential for glaucoma. Our dataset also addresses the disparity of representation of this particular population in normative OCT databases.

Indexed as

AdultAgedCase-Control StudiesCross-Sectional StudiesEyeFemaleGlaucomaHumansMaleMiddle AgedTomography, Optical CoherenceVisual Fields

Identifiers

PMID34857787
PMCPMC8639843
OpenAlexW3128759975

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.