Evidence map›Paper›PMID 34857783›Full record

ArticleScientific reports2021

Nitrogen deficiency results in changes to cell wall composition of sorghum seedlings.

Reza Ramdan Rivai, Takuji Miyamoto, Tatsuya Awano, Rie Takada, Yuki Tobimatsu, Toshiaki Umezawa, Masaru Kobayashi

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it, 31 citations in OpenAlex.

  1. Pooled it
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  3. Review
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  7. Article
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  9. Metabolic engineering ofPlant biotechnology (Tokyo, Japan) · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 2 countries.

Reza Ramdan RivaiDivision of Applied Life Sciences, Graduate School of Agriculture, Kyoto University, Kyoto, 606-8502, Japan.
Takuji MiyamotoResearch Institute for Sustainable Humanosphere, Kyoto University, Uji, Kyoto, 611-0011, Japan.
Tatsuya AwanoDivision of Forest and Biomaterials Science, Graduate School of Agriculture, Kyoto University, Kyoto, 606-8502, Japan.
Rie TakadaResearch Institute for Sustainable Humanosphere, Kyoto University, Uji, Kyoto, 611-0011, Japan.
Yuki TobimatsuResearch Institute for Sustainable Humanosphere, Kyoto University, Uji, Kyoto, 611-0011, Japan.
Toshiaki UmezawaResearch Institute for Sustainable Humanosphere, Kyoto University, Uji, Kyoto, 611-0011, Japan.
Masaru KobayashiDivision of Applied Life Sciences, Graduate School of Agriculture, Kyoto University, Kyoto, 606-8502, Japan. kobayashi.masaru.8e@kyoto-u.ac.jp.
Kyoto University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sorghum [Sorghum bicolor (L.) Moench] has been gaining attention as a feedstock for biomass energy production. While it is obvious that nitrogen (N) supply significantly affects sorghum growth and biomass accumulation, our knowledge is still limited regarding the effect of N on the biomass quality of sorghum, such as the contents and structures of lignin and other cell wall components. Therefore, in this study, we investigated the effects of N supply on the structure and composition of sorghum cell walls. The cell walls of hydroponically cultured sorghum seedlings grown under sufficient or deficient N conditions were analyzed using chemical, two-dimensional nuclear magnetic resonance, gene expression, and immunohistochemical methods. We found that the level of N supply considerably affected the cell wall structure and composition of sorghum seedlings. Limitation of N led to a decrease in the syringyl/guaiacyl lignin unit ratio and an increase in the amount and alteration of tissue distribution of several hemicelluloses, including mixed linkage (1 → 3), (1 → 4)-β-D-glucan, and arabinoxylan. At least some of these cell wall alterations could be associated with changes in gene expression. Nitrogen status is thus one of the factors affecting the cell wall properties of sorghum seedlings.

Indexed as

beta-GlucansBiomassCell WallEnergy MetabolismGene ExpressionGene Expression Regulation, PlantLigninNitrogenPolysaccharidesSeedlingsSorghumXylansarabinoxylanbeta-glucan, (1-3)(1-4)-beta-GlucanshemicelluloseLigninNitrogenPolysaccharidesXylans

Identifiers

PMID34857783
PMCPMC8640004
OpenAlexW3216134302

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.