Evidence map›Paper›PMID 34853907›Full record

ArticleJournal of plant research2022

RAV transcription factor regulatory function in response to salt stress in two Iranian wheat landraces.

Mohamad Karami, Narjes Fatahi, Tahmineh Lohrasebi, Khadijeh Razavi

Abstract read
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In one paragraph

Article in Journal of plant research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.5field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Plants (Basel, Switzerland) · 2023
    Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Mohamad KaramiAgriculture Biotechnology Department, National Institute of Genetic Engineering and Biotechnology (NIGEB), Tehran, Iran.
Narjes FatahiTehranshargh, Science Faculty, Payamnoor University, Tehran, Iran.
Tahmineh LohrasebiAgriculture Biotechnology Department, National Institute of Genetic Engineering and Biotechnology (NIGEB), Tehran, Iran.ORCID http://orcid.org/0000-0001-5062-1655
Khadijeh RazaviAgriculture Biotechnology Department, National Institute of Genetic Engineering and Biotechnology (NIGEB), Tehran, Iran. razavi@nigeb.ac.ir.ORCID http://orcid.org/0000-0002-7297-3157
National Institute of Genetic Engineering and Biotechnology · IRPayame Noor University · IR

Funding

Ministry of Science Research and Technology India-Iran Joint call in 2018National Institute for Genetic Engineering and Biotechnology 451M
6 · The paper itself

Abstract

Amongst the transcription factor groups, the AP2/ERF (Apetala2/Ethylene Response Factor) superfamily is one of the main groups in plants and plays an essential role in tolerating abiotic and biotic stresses. The AP2/ERF superfamily consists of ERF, AP2, RAV, and Soloist families based on the AP2 domain number. The RAV (Related to ABI3/VP1) family members have been revealed to be stimulate by a number of biotic and abiotic environmental incentives; including pathogen infection, salicylic acid, osmotic stress, cold, high salinity, wounding, and exogenous hormone application. However, limited data are available on the contributions of RAV transcription factors in wheat (Triticum aestivum L.). In the present study, a total of 26 RAV genes were identified in wheat from a genome-wide search against the latest wheat genome data. Phylogenetic and sequence alignment analyses divided the wheat RAV genes into 4 clusters, I, II, III and IV. Chromosomal distribution, gene structure and motif composition were subsequently investigated. The 26 TaRAV genes were unevenly distributed on 21 chromosomes. After cloning and sequencing of 7 TaRAVs candidate genes the expression levels of two TaRAVs, TaRAV4 and TaRAV5, were validated through qPCR analyses in two salt-tolerant Iranian landraces of wheat. Our results showed that the TaRAV4 and TaRAV5 were co-expressed in wheat tissues and were highly correlated to salt tolerance indices such as the K

Indexed as

Transcription FactorsTriticumGene Expression Regulation, PlantIranMultigene FamilyPhylogenyPlant ProteinsSalt StressStress, PhysiologicalPlant ProteinsTranscription FactorsProtein–protein interaction networkRAV transcription factorSalt stressStructure predictionWheat

Identifiers

PMID34853907
OpenAlexW3216585179

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.