Evidence map›Paper›PMID 34853330›Full record

ArticleScientific reports2021

Metabarcoding analysis of trophic sources and linkages in the plankton community of the Kuroshio and neighboring waters.

Toru Kobari, Yusuke Tokumo, Ibuki Sato, Gen Kume, Junya Hirai

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 18 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Toru KobariFaculty of Fisheries, Kagoshima University, 4-50-20 Shimoarata, Kagoshima, 8900056, Japan. kobari@fish.kagoshima-u.ac.jp.
Yusuke TokumoGraduate School of Agriculture, Forestry and Fisheries, Kagoshima University, 4-50-20 Shimoarata, Kagoshima, 8900056, Japan.
Ibuki SatoFaculty of Fisheries, Kagoshima University, 4-50-20 Shimoarata, Kagoshima, 8900056, Japan.
Gen KumeFaculty of Fisheries, Kagoshima University, 4-50-20 Shimoarata, Kagoshima, 8900056, Japan.
Junya HiraiAtmosphere and Ocean Research Institute, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, 277-8564, Japan.
Kagoshima University · JPThe University of Tokyo · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Trophic sources and pathways supporting early life stages are crucial for survival of forage fishes recruiting around the oligotrophic and unproductive Kuroshio. However, information is limited for the Kuroshio planktonic food web and its trophodynamics because of its high biodiversity. Here, we explore trophic sources and linkages in the Kuroshio plankton community using metabarcoding analysis of gut-content DNA for 22 mesozooplankton groups. The major prey was dinoflagellates and calanoids for omnivorous groups, and calanoids and gelatinous organisms for carnivorous groups. Larvaceans and hydrozoans were the most frequently appeared prey for both omnivores and carnivores, whereas they were minor constituents of the available prey in water samples. Although calanoids overlapped as major prey items for both omnivores and carnivores because they were the most available, contributions from phytoplankton and gelatinous prey differed among taxonomic groups. Further analysis of the metabarcoding data showed that in addition to omnivorous copepods like calanoids, gelatinous groups like larvaceans and hydrozoans were important hubs in the planktonic food web with their multiple trophic linkages to many components. These findings suggest that gelatinous organisms are important as supplementary prey and provide evidence of niche segregation on trophic sources among mesozooplankton groups in the Kuroshio.

Indexed as

DNA Barcoding, TaxonomicAnimalsBiomassChinaComputational BiologyCopepodaDinoflagellidaEcosystemFishesFood ChainHigh-Throughput Nucleotide SequencingJapanMultivariate AnalysisPhytoplanktonPlanktonWaterWater

Identifiers

PMID34853330
PMCPMC8636560
OpenAlexW3217364785

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.