Evidence map›Paper›PMID 34853317›Full record

ArticleNature communications2021

Mounting, structure and autocleavage of a type VI secretion-associated Rhs polymorphic toxin.

Dukas Jurėnas, Leonardo Talachia Rosa, Martial Rey, Julia Chamot-Rooke, Rémi Fronzes, Eric Cascales

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
8.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 61 citations in OpenAlex.

  1. Article
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  8. Characterization ofMicrobial genomics · 2026
    Article
  9. Review
  10. Article
  11. Article
  12. The SPI-6 T6SS gene cluster fromFrontiers in microbiology · 2026
    Article
  13. Article
  14. Review
  15. Article
  16. Soil microbiome bacteria protect plants against filamentous fungal infections via intercellular contacts.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  17. Journal of oral microbiology · 2025
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Dukas Jurėnas *Laboratoire d'Ingénierie des Systèmes Macromoléculaires (LISM), Institut de Microbiologie, Bioénergies et Biotechnologie (IM2B), Aix-Marseille Université - CNRS, UMR 7255, Marseille, France. djurenas@imm.cnrs.fr.ORCID http://orcid.org/0000-0003-1660-1524
Leonardo Talachia Rosa *Structure and Function of Bacterial Nanomachines, Institut Européen de Chimie et Biologie, Univ. Bordeaux - CNRS, UMR 5234 Microbiologie Fondamentale et Pathogénicité, 33600, Pessac, France.ORCID http://orcid.org/0000-0003-0527-6391
Martial ReyMass Spectrometry for Biology Unit, Department of Structural Biology and Chemistry, Institut Pasteur - CNRS, USR 2000, 75015, Paris, France.ORCID http://orcid.org/0000-0002-7378-1106
Julia Chamot-RookeMass Spectrometry for Biology Unit, Department of Structural Biology and Chemistry, Institut Pasteur - CNRS, USR 2000, 75015, Paris, France.ORCID http://orcid.org/0000-0002-9427-543X
Rémi FronzesStructure and Function of Bacterial Nanomachines, Institut Européen de Chimie et Biologie, Univ. Bordeaux - CNRS, UMR 5234 Microbiologie Fondamentale et Pathogénicité, 33600, Pessac, France. r.fronzes@iecb.u-bordeaux.fr.ORCID http://orcid.org/0000-0003-3031-9824
Eric CascalesLaboratoire d'Ingénierie des Systèmes Macromoléculaires (LISM), Institut de Microbiologie, Bioénergies et Biotechnologie (IM2B), Aix-Marseille Université - CNRS, UMR 7255, Marseille, France. cascales@imm.cnrs.fr.ORCID http://orcid.org/0000-0003-0611-9179
Centre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacteria have evolved toxins to outcompete other bacteria or to hijack host cell pathways. One broad family of bacterial polymorphic toxins gathers multidomain proteins with a modular organization, comprising a C-terminal toxin domain fused to a N-terminal domain that adapts to the delivery apparatus. Polymorphic toxins include bacteriocins, contact-dependent growth inhibition systems, and specialized Hcp, VgrG, PAAR or Rhs Type VI secretion (T6SS) components. We recently described and characterized Tre23, a toxin domain fused to a T6SS-associated Rhs protein in Photorhabdus laumondii, Rhs1. Here, we show that Rhs1 forms a complex with the T6SS spike protein VgrG and the EagR chaperone. Using truncation derivatives and cross-linking mass spectrometry, we demonstrate that VgrG-EagR-Rhs1 complex formation requires the VgrG C-terminal β-helix and the Rhs1 N-terminal region. We then report the cryo-electron-microscopy structure of the Rhs1-EagR complex, demonstrating that the Rhs1 central region forms a β-barrel cage-like structure that encapsulates the C-terminal toxin domain, and provide evidence for processing of the Rhs1 protein through aspartyl autoproteolysis. We propose a model for Rhs1 loading on the T6SS, transport and delivery into the target cell.

Indexed as

Adaptation, PhysiologicalBacterial ProteinsBacterial ToxinsBacteriocinsContact InhibitionCryoelectron MicroscopyMass SpectrometryModels, MolecularPhotorhabdusType VI Secretion SystemsBacterial ProteinsBacterial ToxinsBacteriocinsType VI Secretion Systems

Identifiers

PMID34853317
PMCPMC8636562
OpenAlexW3216515447

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.