Evidence map›Paper›PMID 34853070›Full record

ArticleCancer research2022

Multiomics Analysis of Spatially Distinct Stromal Cells Reveals Tumor-Induced O-Glycosylation of the CDK4-pRB Axis in Fibroblasts at the Invasive Tumor Edge.

Gina Bouchard, Fernando Jose Garcia-Marques, Loukia Georgiou Karacosta, Weiruo Zhang, Abel Bermudez, Nicholas McIlvain Riley, Sushama Varma, Lindsey Catherine Mehl, Jalen Anthony Benson, Joseph B Shrager and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Cancer research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 42 citations in OpenAlex.

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  6. HAS1Journal of experimental & clinical cancer research : CR · 2025
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  12. QnAs with Carolyn R. Bertozzi.Proceedings of the National Academy of Sciences of the United States of America · 2023
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 2 countries.

Gina BouchardDepartment of Biomedical Data Science, Stanford University, Stanford, California.
Fernando Jose Garcia-MarquesDepartment of Radiology, Canary Center for Cancer Early Detection, Palo Alto, California.ORCID 0000-0002-2105-2905
Loukia Georgiou KaracostaDepartment of Biomedical Data Science, Stanford University, Stanford, California.
Weiruo ZhangDepartment of Biomedical Data Science, Stanford University, Stanford, California.
Abel BermudezDepartment of Radiology, Canary Center for Cancer Early Detection, Palo Alto, California.
Nicholas McIlvain RileyDepartments of Chemistry, Stanford University, Stanford, California.ORCID 0000-0002-1536-2966
Sushama VarmaDepartment of Pathology, Stanford University, Stanford, California.
Lindsey Catherine MehlDepartment of Biomedical Data Science, Stanford University, Stanford, California.ORCID 0000-0002-2042-9117
Jalen Anthony BensonDepartment of Cardiothoracic Surgery, Stanford University, Stanford, California.
Joseph B ShragerDepartment of Cardiothoracic Surgery, Stanford University, Stanford, California.
Carolyn Ruth BertozziDepartments of Chemistry, Stanford University, Stanford, California.
Sharon J PitteriDepartment of Radiology, Canary Center for Cancer Early Detection, Palo Alto, California.ORCID 0000-0002-3119-873X
Amato J GiacciaDepartment of Radiation Oncology, Stanford University, Stanford, California.ORCID 0000-0002-1940-2750
Sylvia Katina PlevritisDepartment of Biomedical Data Science, Stanford University, Stanford, California.
Stanford University · USCenter for Cancer Research · USStanford Medicine · USUniversity of Oxford · GB

Funding

POSTDOCTORAL TRAINING IN MEDICAL INFORMATION SCIENCEST15LM007033 · NLM · STANFORD UNIVERSITY · PI SYLVIA KATINA PLEVRITIS · 1985 to 2026
$25.5M
Leveraging innovative technologies in basic and clinical cancer researchT32CA009302 · NCI · STANFORD UNIVERSITY · PI LAURA D ATTARDI, Aaron M Newman · 1985 to 2026
$19.1M
Spatial-Genomic Integrative Multi-Species Analysis of Lymph Node MetastasisU54CA209971 · NCI · STANFORD UNIVERSITY · PI NOLAN, GARRY P, PLEVRITIS, SYLVIA KATINA · 2016 to 2021
$11.0M
Investigating the Surface GlycoproteomeR01CA200423 · NCI · STANFORD UNIVERSITY · PI Carolyn Bertozzi · 2015 to 2026
$3.8M
Glycosylation and Immune Evasion in Urologic TumorsU01CA226051 · NCI · STANFORD UNIVERSITY · PI BERTOZZI, CAROLYN, BROOKS, JAMES D. · 2019 to 2023
$3.0M
Cancer Systems Biology Scholars ProgramR25CA180993 · NCI · STANFORD UNIVERSITY · PI PLEVRITIS, SYLVIA KATINA · 2014 to 2018
$2.2M
Uniting Mass Spectrometry and Glycoscience to Investigate Cancer BiologyK00CA212454 · NCI · STANFORD UNIVERSITY · PI RILEY, NICHOLAS M · 2018 to 2021
$331k
Cancer Research UK 28736Le Fonds de Recherche du Québec-Santé GB #35603Medical Research Council MC_UU_00001/8NCI NIH HHS K00 CA212454NCI NIH HHS R01 CA200423NCI NIH HHS R25 CA180993NCI NIH HHS T32 CA009302NCI NIH HHS U54 CA209971NLM NIH HHS T15 LM007033PHS HHS CA09302
6 · The paper itself

Abstract

The invasive leading edge represents a potential gateway for tumor metastasis. The role of fibroblasts from the tumor edge in promoting cancer invasion and metastasis has not been comprehensively elucidated. We hypothesize that cross-talk between tumor and stromal cells within the tumor microenvironment results in activation of key biological pathways depending on their position in the tumor (edge vs. core). Here we highlight phenotypic differences between tumor-adjacent-fibroblasts (TAF) from the invasive edge and tumor core fibroblasts from the tumor core, established from human lung adenocarcinomas. A multiomics approach that includes genomics, proteomics, and O-glycoproteomics was used to characterize cross-talk between TAFs and cancer cells. These analyses showed that O-glycosylation, an essential posttranslational modification resulting from sugar metabolism, alters key biological pathways including the cyclin-dependent kinase 4 (CDK4) and phosphorylated retinoblastoma protein axis in the stroma and indirectly modulates proinvasive features of cancer cells. In summary, the O-glycoproteome represents a new consideration for important biological processes involved in tumor-stroma cross-talk and a potential avenue to improve the anticancer efficacy of CDK4 inhibitors. SIGNIFICANCE: A multiomics analysis of spatially distinct fibroblasts establishes the importance of the stromal O-glycoproteome in tumor-stroma interactions at the leading edge and provides potential strategies to improve cancer treatment. See related commentary by De Wever, p. 537.

Indexed as

A549 CellsCancer-Associated FibroblastsCell Line, TumorCyclin-Dependent Kinase 4GenomicsGlycoproteinsGlycosylationHumansNeoplasm InvasivenessNeoplasmsPhosphorylationProteomicsRetinoblastoma ProteinSignal TransductionStromal CellsTranscriptomeCDK4 protein, humanCyclin-Dependent Kinase 4GlycoproteinsRetinoblastoma Protein

Identifiers

PMID34853070
PMCPMC9075699
OpenAlexW3216585718

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.