Evidence map›Paper›PMID 34852231›Full record

ArticleCell reports2021

Synaptic protein interaction networks encode experience by assuming stimulus-specific and brain-region-specific states.

Jonathan D Lautz, Kaleb B Tsegay, Zhiyi Zhu, Edward P Gniffke, John P Welsh, Stephen E P Smith

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.9field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 15 citations in OpenAlex.

  1. The Alzheimer's disease risk gene SORL1 is a regulator of excitatory neuronal function.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Jonathan D LautzCenter for Integrative Brain Research, Seattle Children's Research Institute, Seattle, WA, USA.
Kaleb B TsegayCenter for Integrative Brain Research, Seattle Children's Research Institute, Seattle, WA, USA.
Zhiyi ZhuCenter for Integrative Brain Research, Seattle Children's Research Institute, Seattle, WA, USA.
Edward P GniffkeCenter for Integrative Brain Research, Seattle Children's Research Institute, Seattle, WA, USA.
John P WelshCenter for Integrative Brain Research, Seattle Children's Research Institute, Seattle, WA, USA; Department of Pediatrics, University of Washington, Seattle, WA, USA.
Stephen E P SmithCenter for Integrative Brain Research, Seattle Children's Research Institute, Seattle, WA, USA; Department of Pediatrics, University of Washington, Seattle, WA, USA; Graduate Program in Neuroscience, University of Washington, Seattle, WA, USA. Electronic address: seps@uw.edu.
University of Washington · US

Funding

Mechanisms of Brain Dysmorphology in MN1 C-Terminal Truncation Syndrome, a Novel Intellectual Developmental Disability Disorder P50HD103524 · NICHD · UNIVERSITY OF WASHINGTON · PI Sandra E Juul · 2020 to 2026
$9.9M
CENTRAL RHYTHMOGENESIS AND BEHAVIORR01NS031224 · NINDS · SEATTLE CHILDREN'S HOSPITAL · PI WELSH, JOHN P · 1993 to 2019
$7.4M
Investigating the synaptic pathology of AutismR01MH113545 · NIMH · SEATTLE CHILDREN'S HOSPITAL · PI Stephen Edward Paucha Smith · 2018 to 2026
$5.8M
Subtyping the autisms using individualized protein network analysisR01MH121487 · NIMH · SEATTLE CHILDREN'S HOSPITAL · PI SMITH, STEPHEN EDWARD PAUCHA · 2020 to 2021
$1.4M
NICHD NIH HHS P50 HD103524NIMH NIH HHS R01 MH113545NIMH NIH HHS R01 MH121487NINDS NIH HHS R01 NS031224
6 · The paper itself

Abstract

A core network of widely expressed proteins within the glutamatergic post-synapse mediates activity-dependent synaptic plasticity throughout the brain, but the specific proteomic composition of synapses differs between brain regions. Here, we address the question, how does proteomic composition affect activity-dependent protein-protein interaction networks (PINs) downstream of synaptic activity? Using quantitative multiplex co-immunoprecipitation, we compare the PIN response of in vivo or ex vivo neurons derived from different brain regions to activation by different agonists or different forms of eyeblink conditioning. We report that PINs discriminate between incoming stimuli using differential kinetics of overlapping and non-overlapping PIN parameters. Further, these "molecular logic rules" differ by brain region. We conclude that although the PIN of the glutamatergic post-synapse is expressed widely throughout the brain, its activity-dependent dynamics show remarkable stimulus-specific and brain-region-specific diversity. This diversity may help explain the challenges in developing molecule-specific drug therapies for neurological disorders.

Indexed as

Protein Interaction MapsAnimalsBlinkingBrainConditioning, EyelidExcitatory Amino Acid AgonistsFemaleMaleMethoxyhydroxyphenylglycolMiceNeuronal PlasticityN-MethylaspartateProteomeSynapses3,4-dihydroxyphenylglycolExcitatory Amino Acid AgonistsMethoxyhydroxyphenylglycolN-MethylaspartateProteomeeyeblink conditioningPiSCESprotein-protein interactionsignaling

Identifiers

PMID34852231
PMCPMC8722361
OpenAlexW3215040717

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.