Evidence map›Paper›PMID 34851149›Full record

ArticleJournal of virology2022

Time Series Transcriptomic Analysis of Bronchoalveolar Lavage Cells from Piglets Infected with Virulent or Low-Virulent Porcine Reproductive and Respiratory Syndrome Virus 1.

J M Sánchez-Carvajal, I M Rodríguez-Gómez, I Ruedas-Torres, S Zaldívar-López, F Larenas-Muñoz, R Bautista-Moreno, J J Garrido, F J Pallarés, L Carrasco, J Gómez-Laguna

Open access · hybridAbstract read
In one paragraph

Article in Journal of virology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
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  7. Review
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  11. The scene of lung pathology during PRRSV-1 infection.Frontiers in veterinary science · 2024
    Review
  12. Article
  13. Article
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  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

J M Sánchez-CarvajalDepartment of Anatomy and Comparative Pathology and Toxicology, Faculty of Veterinary Medicine, University of Córdobagrid.411901.c, Córdoba, Spain.ORCID 0000-0003-0852-3765
I M Rodríguez-GómezDepartment of Anatomy and Comparative Pathology and Toxicology, Faculty of Veterinary Medicine, University of Córdobagrid.411901.c, Córdoba, Spain.ORCID 0000-0003-4743-284X
I Ruedas-TorresDepartment of Anatomy and Comparative Pathology and Toxicology, Faculty of Veterinary Medicine, University of Córdobagrid.411901.c, Córdoba, Spain.
S Zaldívar-LópezDepartment of Genetics, Faculty of Veterinary Medicine, University of Córdobagrid.411901.c, Córdoba, Spain.
F Larenas-MuñozDepartment of Anatomy and Comparative Pathology and Toxicology, Faculty of Veterinary Medicine, University of Córdobagrid.411901.c, Córdoba, Spain.
R Bautista-MorenoAndalusian Platform of Bioinformatic, University of Málaga, Campanillas, Málaga, Spain.
J J GarridoDepartment of Genetics, Faculty of Veterinary Medicine, University of Córdobagrid.411901.c, Córdoba, Spain.
F J PallarésDepartment of Anatomy and Comparative Pathology and Toxicology, Faculty of Veterinary Medicine, University of Córdobagrid.411901.c, Córdoba, Spain.
L CarrascoDepartment of Anatomy and Comparative Pathology and Toxicology, Faculty of Veterinary Medicine, University of Córdobagrid.411901.c, Córdoba, Spain.
J Gómez-LagunaDepartment of Anatomy and Comparative Pathology and Toxicology, Faculty of Veterinary Medicine, University of Córdobagrid.411901.c, Córdoba, Spain.
University of Córdoba · ESUniversidad de Málaga · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Porcine reproductive and respiratory syndrome virus (PRRSV) has evolved to escape the immune surveillance for a survival advantage leading to a strong modulation of host's immune responses and favoring secondary bacterial infections. However, limited data are available on how the immunological and transcriptional responses elicited by virulent and low-virulent PRRSV-1 strains are comparable and how they are conserved during the infection. To explore the kinetic transcriptional signature associated with the modulation of host immune response at lung level, a time-series transcriptomic analysis was performed in bronchoalveolar lavage cells upon experimental

Indexed as

Gene Expression ProfilingGene Expression RegulationHost-Pathogen InteractionsTranscriptomeAnimalsBiopsyBronchoalveolar LavageComputational BiologyGene OntologyGene Regulatory NetworksLeukocyte CountPorcine Reproductive and Respiratory SyndromePorcine respiratory and reproductive syndrome virusProtein Interaction MappingProtein Interaction MapsSwinebronchoalveolar lavage cellsHub genesimmune checkpointsporcine reproductive and respiratory syndrome virusT-cellstime-series transcriptomic analysisvirulence

Identifiers

PMID34851149
PMCPMC8826917
OpenAlexW3216635820

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.