Evidence map›Paper›PMID 34851142›Full record

ArticleJournal of virology2022

Development of a Single-Cycle Infectious SARS-CoV-2 Virus Replicon Particle System for Use in Biosafety Level 2 Laboratories.

Johnny Malicoat, Senthamizharasi Manivasagam, Sonia Zuñiga, Isabel Sola, Dianne McCabe, Lijun Rong, Stanley Perlman, Luis Enjuanes, Balaji Manicassamy

Open access · hybridAbstract read
In one paragraph

Article in Journal of virology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
2.1field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 39 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Johnny MalicoatDepartment of Microbiology and Immunology, University of Iowagrid.214572.7, Iowa City, Iowa, USA.
Senthamizharasi ManivasagamDepartment of Microbiology and Immunology, University of Iowagrid.214572.7, Iowa City, Iowa, USA.
Sonia ZuñigaCoronavirus Laboratory, Departamento Biologia Molecular y Celular, Centro Nacional de Biotecnologia (CNB-CSIC), Madrid, Spain.
Isabel SolaCoronavirus Laboratory, Departamento Biologia Molecular y Celular, Centro Nacional de Biotecnologia (CNB-CSIC), Madrid, Spain.
Dianne McCabeDepartment of Microbiology and Immunology, University of Iowagrid.214572.7, Iowa City, Iowa, USA.
Lijun RongDepartment of Microbiology and Immunology, University of Illinois at Chicagogrid.185648.6, Chicago, Illinois, USA.
Stanley PerlmanDepartment of Microbiology and Immunology, University of Iowagrid.214572.7, Iowa City, Iowa, USA.ORCID 0000-0003-4213-2354
Luis EnjuanesCoronavirus Laboratory, Departamento Biologia Molecular y Celular, Centro Nacional de Biotecnologia (CNB-CSIC), Madrid, Spain.ORCID 0000-0002-0854-0226
Balaji ManicassamyDepartment of Microbiology and Immunology, University of Iowagrid.214572.7, Iowa City, Iowa, USA.ORCID 0000-0003-1964-0967
University of Iowa · USCentro Nacional de Biotecnología · ESUniversity of Illinois Chicago · US

Funding

SARS-CoV Proteins in Heterologous Viral InfectionP01AI060699 · NIAID · UNIVERSITY OF IOWA · PI PERLMAN, STANLEY · 2004 to 2021
$21.5M
Role of eicosanoids in pathogenic human CoV infectionsR01AI129269 · NIAID · UNIVERSITY OF IOWA · PI Stanley Perlman · 2016 to 2026
$4.7M
ENDOTHELIAL CELL TROPISM IN THE PATHOGENESIS AND HOST RESPONSE AGAINST INFLUENZA VIRUSES - RESUBMISSION 01R01AI127775 · NIAID · UNIVERSITY OF IOWA · PI MANICASSAMY, BALAJI · 2018 to 2022
$2.8M
Modulation of Influenza Virus Replication and Fitness by Adenosine DeaminasesR01AI123359 · NIAID · UNIVERSITY OF IOWA · PI MANICASSAMY, BALAJI · 2016 to 2020
$1.9M
COVID Pilot Grant - Carver Trust- University of Iowa N/ADivision of Microbiology and Infectious Diseases, National Institute of Allergy and Infectious Diseases AI123359HHS | NIH | NIAID | Division of Microbiology and Infectious Diseases, National Institute of Allergy and Infectious Diseases (DMID) R01AI127775NIAID NIH HHS P01 AI060699NIAID NIH HHS R01 AI123359NIAID NIH HHS R01 AI127775NIAID NIH HHS R01 AI129269
6 · The paper itself

Abstract

Research activities with infectious severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) are currently permitted only under biosafety level 3 (BSL3) containment. Here, we report the development of a single-cycle infectious SARS-CoV-2 virus replicon particle (VRP) system with a luciferase and green fluorescent protein (GFP) dual reporter that can be safely handled in BSL2 laboratories to study SARS-CoV-2 biology. The spike (S) gene of SARS-CoV-2 encodes the envelope glycoprotein, which is essential for mediating infection of new host cells. Through deletion and replacement of this essential S gene with a luciferase and GFP dual reporter, we have generated a conditional SARS-CoV-2 mutant (ΔS-VRP) that produces infectious particles only in cells expressing a viral envelope glycoprotein of choice. Interestingly, we observed more efficient production of infectious particles in cells expressing vesicular stomatitis virus (VSV) glycoprotein G [ΔS-VRP(G)] than in cells expressing other viral glycoproteins, including S. We confirmed that infection from ΔS-VRP(G) is limited to a single round and can be neutralized by anti-VSV serum. In our studies with ΔS-VRP(G), we observed robust expression of both luciferase and GFP reporters in various human and murine cell types, demonstrating that a broad variety of cells can support intracellular replication of SARS-CoV-2. In addition, treatment of ΔS-VRP(G)-infected cells with either of the anti-CoV drugs remdesivir (nucleoside analog) and GC376 (CoV 3CL protease inhibitor) resulted in a robust decrease in both luciferase and GFP expression in a drug dose- and cell-type-dependent manner. Taken together, our findings show that we have developed a single-cycle infectious SARS-CoV-2 VRP system that serves as a versatile platform to study SARS-CoV-2 intracellular biology and to perform high-throughput screening of antiviral drugs under BSL2 containment.

Indexed as

Genetic EngineeringRecombination, GeneticRepliconCell Culture TechniquesCell LineContainment of BiohazardsCOVID-19Genes, ReporterHumansLaboratoriesSARS-CoV-2Viral ProteinsVirus ReplicationViral ProteinsrepliconSARS-CoV-2

Identifiers

PMID34851142
PMCPMC8826801
OpenAlexW3215908987

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.