Evidence map›Paper›PMID 34850097›Full record

ArticleNucleic acids research2021

Controlled RISC loading efficiency of miR168 defined by miRNA duplex structure adjusts ARGONAUTE1 homeostasis.

Ágnes Dalmadi, Fabio Miloro, Jeannette Bálint, Éva Várallyay, Zoltán Havelda

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 25 citations in OpenAlex.

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  19. InFrontiers in plant science · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Ágnes DalmadiHungarian University of Agriculture and Life Sciences, Institute of Genetics and Biotechnology, Páter Károly Street 1, Gödöllő 2100, Hungary.ORCID 0000-0002-8070-2752
Fabio MiloroHungarian University of Agriculture and Life Sciences, Institute of Genetics and Biotechnology, Páter Károly Street 1, Gödöllő 2100, Hungary.ORCID 0000-0002-7637-088X
Jeannette BálintNational Agricultural Research and Innovation Centre, Agricultural Biotechnology Institute, Szent-Györgyi Albert Street 4, Gödöllő 2100, Hungary.
Éva VárallyayHungarian University of Agriculture and Life Sciences, Institute of Plant Protection, Ménesi Street 44, Budapest 1118, Hungary.ORCID 0000-0002-9085-942X
Zoltán HaveldaHungarian University of Agriculture and Life Sciences, Institute of Genetics and Biotechnology, Páter Károly Street 1, Gödöllő 2100, Hungary.ORCID 0000-0002-6349-7646
Magyar Agrár- és Élettudományi Egyetem · HUAgricultural Biotechnology Institute · HU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Micro RNAs (miRNAs) are processed from precursor RNA molecules with precisely defined secondary stem-loop structures. ARGONAUTE1 (AGO1) is the main executor component of miRNA pathway and its expression is controlled via the auto-regulatory feedback loop activity of miR168 in plants. Previously we have shown that AGO1 loading of miR168 is strongly restricted leading to abundant cytoplasmic accumulation of AGO-unbound miR168. Here, we report, that intrinsic RNA secondary structure of MIR168a precursor not only defines the processing of miR168, but also precisely adjusts AGO1 loading efficiency determining the biologically active subset of miR168 pool. Our results show, that modification of miRNA duplex structure of MIR168a precursor fragment or expression from artificial precursors can alter the finely adjusted loading efficiency of miR168. In dcl1-9 mutant where, except for miR168, production of most miRNAs is severely reduced this mechanism ensures the elimination of unloaded AGO1 proteins via enhanced AGO1 loading of miR168. Based on this data, we propose a new competitive loading mechanism model for miR168 action: the miR168 surplus functions as a molecular buffer for controlled AGO1 loading continuously adjusting the amount of AGO1 protein in accordance with the changing size of the cellular miRNA pool.

Indexed as

RNA InterferenceArabidopsisArabidopsis ProteinsArgonaute ProteinsBase SequenceGene Expression Regulation, PlantHomeostasisMicroRNAsMutationPlants, Genetically ModifiedProtein BindingReverse Transcriptase Polymerase Chain ReactionRNA-Induced Silencing ComplexRNA PrecursorsSequence Homology, Nucleic AcidAGO1 protein, ArabidopsisArabidopsis ProteinsArgonaute ProteinsMicroRNAsMIRN168 microRNA, ArabidopsisRNA-Induced Silencing ComplexRNA Precursors

Identifiers

PMID34850097
PMCPMC8682782
OpenAlexW3214946678

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.