Evidence map›Paper›PMID 34849445›Full record

ArticleJCO precision oncology2021

Association of 17q22 Amplicon Via Cell-Free DNA With Platinum Chemotherapy Response in Metastatic Triple-Negative Breast Cancer.

Katharine A Collier, Sarah Asad, David Tallman, Janet Jenison, Andrei Rajkovic, Elaine R Mardis, Heather A Parsons, Sara M Tolaney, Eric P Winer, Nancy U Lin and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in JCO precision oncology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

  1. Confirmation of large BRCA2 reversion deletions leading to reconstituted in-frame transcripts detected via circulating tumor DNA.Annals of oncology : official journal of the European Society for Medical Oncology · 2024
    Article
  2. Article
  3. Review
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 1 country.

Katharine A CollierDivision of Medical Oncology, The Ohio State University College of Medicine, Columbus, OH.
Sarah AsadOhio State University Comprehensive Cancer Center, Columbus, OH.
David TallmanOhio State University Comprehensive Cancer Center, Columbus, OH.
Janet JenisonOhio State University Comprehensive Cancer Center, Columbus, OH.
Andrei RajkovicInstitute for Genomic Medicine, Nationwide Children's Hospital, Columbus, OH.
Elaine R MardisInstitute for Genomic Medicine, Nationwide Children's Hospital, Columbus, OH.
Heather A ParsonsDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.
Sara M TolaneyDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.
Eric P WinerDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.
Nancy U LinDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.
Gavin HaFred Hutchinson Cancer Research Center, Seattle, WA.
Viktor A AdalsteinssonBroad Institute of Harvard and MIT, Cambridge, MA.
Daniel G StoverDivision of Medical Oncology, The Ohio State University College of Medicine, Columbus, OH.
The Ohio State University · USDana-Farber Cancer Institute · USNationwide Children's Hospital · USBroad Institute · USFred Hutch Cancer Center · US

Funding

Tissue and Pathology CoreP50CA168504 · NCI · DANA-FARBER CANCER INST · PI LEIF W ELLISEN · 2013 to 2026
$30.1M
UM1 Supplement for Early Therapeutic Trials with Phase 2 IntentUM1CA186712 · NCI · OHIO STATE UNIVERSITY · PI SUSANNE M ARNOLD, WILLIAM E. CARSON · 2014 to 2026
$19.3M
Can a subset of patients with HER2+ metastatic breast cancer be cured?K08CA252639 · NCI · FRED HUTCHINSON CANCER CENTER · PI PARSONS, HEATHER ANNE · 2021 to 2025
$1.3M
Training Hematology and Oncology Fellows in Clinical ResearchT32CA247815 · NCI · OHIO STATE UNIVERSITY · PI VERSCHRAEGEN, CLAIRE F., WESOLOWSKI, ROBERT · 2020 to 2024
$862k
Assay Validation of Cell-Free DNA Shallow Whole Genome Sequencing To Determine 'Tumor Fraction' in Advanced CancersUH3CA239105 · NCI · BROAD INSTITUTE, INC. · PI ADALSTEINSSON, VIKTOR, LENNON, NIALL JOHN · 2022 to 2024
$762k
Assay Validation of Cell-Free DNA Shallow Whole Genome Sequencing To Determine 'Tumor Fraction' in Advanced CancersUH2CA239105 · NCI · BROAD INSTITUTE, INC. · PI ADALSTEINSSON, VIKTOR, LENNON, NIALL JOHN · 2020 to 2021
$321k
NCI NIH HHS K08 CA252639NCI NIH HHS P50 CA168504NCI NIH HHS T32 CA247815NCI NIH HHS UH2 CA239105NCI NIH HHS UH3 CA239105NCI NIH HHS UM1 CA186712
6 · The paper itself

Abstract

purposeTo determine whether specific somatic copy-number alterations detectable in circulating tumor DNA (ctDNA) from patients with metastatic triple-negative breast cancer (mTNBC) are associated with sensitivity to platinum chemotherapy. MATERIALS AND

methodsIn this secondary analysis of a large cohort of patients with mTNBC whose ctDNA underwent ultralow-pass whole-genome sequencing, tumor fraction and somatic copy-number alterations were derived with the ichorCNA algorithm. Seventy-two patients were identified who had received a platinum-based chemotherapy regimen in the metastatic setting. Gene-level copy-number analyses were performed with GISTIC2.0. Cytobands were associated with progression-free survival (PFS) to platinum chemotherapy using Cox proportional hazards models. The Cancer Genome Atlas and Molecular Taxonomy of Breast Cancer International Consortium data sets were interrogated for frequency of significant cytobands in primary triple-negative breast cancer (pTNBC) tumors.

resultsAmong 71 evaluable patients, 17q21 and 17q22 amplifications were most strongly associated with improved PFS with platinum chemotherapy. There were no significant differences in clinicopathologic features or (neo)adjuvant chemotherapy among patients with 17q22 amplification. Patients with 17q22 amplification (n = 17) had longer median PFS with platinum (7.0

conclusionThe 17q22 amplicon, detected by ctDNA, is associated with improved PFS with platinum chemotherapy in patients with mTNBC and warrants further investigation.

Indexed as

Cell-Free Nucleic AcidsTriple Negative Breast NeoplasmsAntineoplastic Combined Chemotherapy ProtocolsCapecitabineHumansPlatinumCapecitabineCell-Free Nucleic AcidsPlatinum

Identifiers

PMID34849445
PMCPMC8624042
OpenAlexW3214749200

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.