Evidence map›Paper›PMID 34849375›Full record

ArticleJournal of immunology research2021

An Immune Atlas of Nephrolithiasis: Single-Cell Mass Cytometry on SIRT3 Knockout and Calcium Oxalate-Induced Renal Injury.

Wei Zhang, Ling Li, Ti Zhang, Xiaomin Gao, Zeyu Wang, Shaoxiong Ming, Ziyu Fang, Min Liu, Hao Dong, Baoyi Zhu and 4 more

Open access · goldAbstract read
In one paragraph

Article in Journal of immunology research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Sirtuins in kidney health and disease.Nature reviews. Nephrology · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Wei ZhangDepartment of Urology, Changhai Hospital, Naval Medical University, Shanghai 200433, China.ORCID https://orcid.org/0000-0002-0015-7855
Ling LiDepartment of Urology, Changhai Hospital, Naval Medical University, Shanghai 200433, China.
Ti ZhangNational Clinical Research Center of Kidney Diseases, Jinling Hospital, Nanjing University School of Medicine, Nanjing, 210002 Jiangsu, China.
Xiaomin GaoDepartment of Urology, Changhai Hospital, Naval Medical University, Shanghai 200433, China.
Zeyu WangDepartment of Urology, Changhai Hospital, Naval Medical University, Shanghai 200433, China.
Shaoxiong MingDepartment of Urology, Changhai Hospital, Naval Medical University, Shanghai 200433, China.
Ziyu FangDepartment of Urology, Changhai Hospital, Naval Medical University, Shanghai 200433, China.
Min LiuDepartment of Urology, Changhai Hospital, Naval Medical University, Shanghai 200433, China.
Hao DongDepartment of Urology, Changhai Hospital, Naval Medical University, Shanghai 200433, China.
Baoyi ZhuDepartment of Urology, The Sixth Affiliated Hospital of Guangzhou Medical University, Qingyuan People's Hospital, Qingyuan, 511518 Guangdong, China.
Junhao LiaoDepartment of Urology, The Sixth Affiliated Hospital of Guangzhou Medical University, Qingyuan People's Hospital, Qingyuan, 511518 Guangdong, China.
Jianwen ZengDepartment of Urology, The Sixth Affiliated Hospital of Guangzhou Medical University, Qingyuan People's Hospital, Qingyuan, 511518 Guangdong, China.ORCID https://orcid.org/0000-0002-7413-6061
Yonghan PengDepartment of Urology, Changhai Hospital, Naval Medical University, Shanghai 200433, China.ORCID https://orcid.org/0000-0002-2447-8813
Xaiofeng GaoDepartment of Urology, Changhai Hospital, Naval Medical University, Shanghai 200433, China.ORCID https://orcid.org/0000-0001-5181-0888
Second Military Medical University · CNThird Affiliated Hospital of Guangzhou Medical University · CNNanjing General Hospital of Nanjing Military Command · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAs a common urological disease with a high recurrence rate, nephrolithiasis caused by CaOx may elicit a strong immunologic response. We present a CyTOF-based atlas of the immune landscape in nephrolithiasis models to understand how the immune system contributes to, and is affected by, the underlying response caused by SIRT3 knockout and CaOx inducement. MATERIALS AND

methodsWe performed a large-scale CyTOF analysis of immune cell abundance profiles in nephrolithiasis. The immunophenotyping data were collected from four different mouse models, including the SIRT3 wild-type or knockout, including and excluding CaOx inducement. Unsupervised analysis strategies, such as SPADE and viSNE, revealed the intrarenal resident immune components and the immune alterations caused by SIRT3 knockout and CaOx-induced renal injury.

resultsAn overview analysis of the immune landscape identified T cells and macrophages as the main immune cell population in nephrolithiasis models. Highly similar phenotypes were observed among CD4

conclusionIn a CaOx-induced nephrolithiasis model, SIRT3 has a critical role in regulating the immune system, especially in reducing inflammatory injury. The characteristic panel of altered immune clusters and markers provides novel insights leading to improved prediction and management of nephrolithiasis.

Indexed as

Acute Kidney InjuryAnimalsCalcium OxalateDisease Models, AnimalHumansMacrophagesMass SpectrometryMiceMice, Inbred C57BLMice, KnockoutNephrolithiasisSingle-Cell AnalysisSirtuin 3T-LymphocytesT-Lymphocyte SubsetsCalcium OxalateSirtuin 3

Identifiers

PMID34849375
PMCPMC8627562
OpenAlexW3216254072

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.