Evidence map›Paper›PMID 34848794›Full record

ArticleScientific reports2021

Coordination of retrotransposons and type I interferon with distinct interferon pathways in dermatomyositis, systemic lupus erythematosus and autoimmune blistering disease.

Yuko Kuriyama, Akira Shimizu, Saki Kanai, Daisuke Oikawa, Sei-Ichiro Motegi, Fuminori Tokunaga, Osamu Ishikawa

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 28 citations in OpenAlex.

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  7. A type I interferon regulatory network for human plasmacytoid dendritic cells based on heparin, membrane-bound and soluble BDCA-2.Proceedings of the National Academy of Sciences of the United States of America · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Yuko KuriyamaDepartment of Dermatology, Gunma University Graduate School of Medicine, Maebashi, Gunma, Japan.
Akira ShimizuDepartment of Dermatology, Gunma University Graduate School of Medicine, Maebashi, Gunma, Japan. ashimizu@kanazawa-med.ac.jp.
Saki KanaiDepartment of Dermatology, Gunma University Graduate School of Medicine, Maebashi, Gunma, Japan.
Daisuke OikawaDepartment of Pathobiochemistry, Graduate School of Medicine, Osaka City University, Osaka, Japan.
Sei-Ichiro MotegiDepartment of Dermatology, Gunma University Graduate School of Medicine, Maebashi, Gunma, Japan.
Fuminori TokunagaDepartment of Pathobiochemistry, Graduate School of Medicine, Osaka City University, Osaka, Japan.
Osamu IshikawaDepartment of Dermatology, Gunma University Graduate School of Medicine, Maebashi, Gunma, Japan.
Gunma University · JPOsaka City University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Type I interferon (IFN) plays a crucial role in innate and adaptive immunity, and aberrant IFN responses are involved in systemic autoimmune diseases, such as systemic lupus erythematosus (SLE) and dermatomyositis (DM). Type I IFNs can be induced by transcribed retrotransposons. The regulation of retrotransposons and type I IFN and the downstream IFN pathways in SLE, DM, and autoimmune blistering disease (AIBD) were investigated. The gene expression levels of retrotransposons, including LINE-1, type I-III IFNs, and IFN-stimulated genes (ISGs) in peripheral blood cells from patients with DM (n = 24), SLE (n = 19), AIBD (n = 14) and healthy controls (HCs, n = 10) were assessed by quantitative polymerase chain reaction. Upregulation of retrotransposons and IFNs was detected in DM patient samples, as is characteristic, compared to HCs; however, ISGs were not uniformly upregulated. In contrast, retrotransposons and IFNs, except for type II IFN, such as IFN-γ, were not upregulated in SLE. In AIBD, only some retrotransposons and type I interferons were upregulated. The DM, SLE, and AIBD samples showed coordinated expression of retrotransposons and type I IFNs and distinct spectra of IFN signaling. A positive correlation between LINE-1 and IFN-β1 was also detected in human cell lines. These factors may participate in the development of these autoimmune diseases.

Indexed as

RetroelementsAdaptive ImmunityAdultAgedAutoimmune DiseasesCell LineDermatomyositisDNA MethylationFemaleGene Expression ProfilingGene Expression RegulationHumansInterferon Type ILong Interspersed Nucleotide ElementsLupus Erythematosus, SystemicMaleInterferon Type IRetroelementsRNA, Messenger

Identifiers

PMID34848794
PMCPMC8632942
OpenAlexW3215951242

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.