Evidence map›Paper›PMID 34847207›Full record

ArticlePloS one2021

The analysis of F-actin structure of mesenchymal stem cells by quantification of fractal dimension.

Alla Revittser, Ivan Selin, Yuri Negulyaev, Vladislav Chubinskiy-Nadezhdin

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Quantifying cytoskeletal organization from optical microscopy data.Frontiers in cell and developmental biology · 2023
    Review
  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Alla RevittserGroup of Ionic Mechanisms of Cell Signaling, Institute of Cytology of the Russian Academy of Sciences, St-Petersburg, Russia.ORCID 0000-0001-9067-5447
Ivan SelinHigher School of Software Engineering, Institute of Computer Science and Technology, Peter the Great St. Petersburg Polytechnic University, St. Petersburg, Russia.ORCID 0000-0002-8805-5887
Yuri NegulyaevGroup of Ionic Mechanisms of Cell Signaling, Institute of Cytology of the Russian Academy of Sciences, St-Petersburg, Russia.
Vladislav Chubinskiy-NadezhdinGroup of Ionic Mechanisms of Cell Signaling, Institute of Cytology of the Russian Academy of Sciences, St-Petersburg, Russia.
Institute of Cytology · RUPeter the Great St. Petersburg Polytechnic University · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The actin cytoskeleton is indispensable for the motility and migration of all types of cells; therefore, it plays a crucial role in the ability of the tissues to repair. Mesenchymal stem cells are intensively used in regenerative medicine, but usually relatively low percent of transplanted cells reaches the injury. To overcome this evident limitation, researchers try to enhance the motility and migration rate of the cells. As one of the approaches, co-cultivation and preconditioning of stem cells with biologically active compounds, which can cause actin cytoskeleton rearrangements followed by an increase of migratory properties of the cells, could be applied. The observed changes in F-actin structure induced by the compounds require quantitative estimation, and measurement of fluorescence intensity of the F-actin image captured by various microscopic techniques is commonly used nowadays. However, this approach could not always accurately detect the observed changes in the shape and structure of actin cytoskeleton. At this time, the image of F-actin has an irregular geometric pattern, and thus could be considered and characterized as a fractal object. To quantify the re-organization of cellular F-actin in terms of fractal geometry Minkovsky's box-counting method is suitable, but it is not widely used nowadays. We modified and improved the previously described method for fractal dimension measurement, and successfully applied it for the quantification of the F-actin structures of human mesenchymal stem cells.

Indexed as

Cell MovementActin CytoskeletonActinsChild, PreschoolHumansMaleMesenchymal Stem CellsProtein ConformationActins

Identifiers

PMID34847207
PMCPMC8631665
OpenAlexW3217548811

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.