Evidence map›Paper›PMID 34847148›Full record

ArticlePloS one2021

Molecular studies into cell biological role of Copine-4 in Retinal Ganglion Cells.

Manvi Goel, Angel M Aponte, Graeme Wistow, Tudor C Badea

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.5field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 2 countries.

Manvi GoelRetinal Circuit Development & Genetics Unit, Neurobiology Neurodegeneration & Repair Laboratory, NEI, National Institutes of Health, Bethesda, Maryland, United States of America.ORCID 0000-0003-2049-5605
Angel M AponteProteomics Core, NHLBI, National Institutes of Health, Bethesda, Maryland, United States of America.
Graeme WistowSection on Molecular Structure and Functional Genomics, NEI, National Institutes of Health, Bethesda, Maryland, United States of America.ORCID 0000-0001-5435-7206
Tudor C BadeaRetinal Circuit Development & Genetics Unit, Neurobiology Neurodegeneration & Repair Laboratory, NEI, National Institutes of Health, Bethesda, Maryland, United States of America.ORCID 0000-0003-3086-6713
National Institutes of Health · US

Funding

Functional Analysis of Novel Genes in Eye Development and VisionZIAEY000433 · NEI · NATIONAL EYE INSTITUTE · PI WISTOW, GRAEME J · 2009 to 2025
$18.2M
Retinal Circuit Development & GeneticsZIAEY000504 · NEI · NATIONAL EYE INSTITUTE · PI BADEA, TUDOR · 2011 to 2021
$15.6M
Functional Analysis of Novel Genes in Eye Development and VisionZ01EY000433 · NEI · NATIONAL EYE INSTITUTE · PI WISTOW, GRAEME J · 2005 to 2008
$1.7M
Intramural NIH HHS Z01 EY000433Intramural NIH HHS ZIA EY000433Intramural NIH HHS ZIA EY000504
6 · The paper itself

Abstract

The molecular mechanisms underlying morphological diversity in retinal cell types are poorly understood. We have previously reported that several members of the Copine family of Ca-dependent membrane adaptors are expressed in Retinal Ganglion Cells and transcriptionally regulated by Brn3 transcription factors. Several Copines are enriched in the retina and their over-expression leads to morphological changes -formation of elongated processes-, reminiscent of neurites, in HEK293 cells. However, the role of Copines in the retina is largely unknown. We now investigate Cpne4, a Copine whose expression is restricted to Retinal Ganglion Cells. Over-expression of Cpne4 in RGCs in vivo led to formation of large varicosities on the dendrites but did not otherwise visibly affect dendrite or axon formation. Protein interactions studies using yeast two hybrid analysis from whole retina cDNA revealed two Cpne4 interacting proteins-Host Cell Factor 1 and Morn2. Mass Spectrometry analysis of retina lysate pulled down using Cpne4 or its vonWillebrand A domain showed 207 interacting proteins. A Gene Ontology analysis of the discovered proteins suggests that Cpne4 is involved in several metabolic and signaling pathways in the retina.

Indexed as

AnimalsAxonsCalcium-Binding ProteinsHEK293 CellsHumansMiceMice, KnockoutNeuritesRetinaRetinal Ganglion CellsTransfectionCalcium-Binding Proteins

Identifiers

PMID34847148
PMCPMC8631636
OpenAlexW3215313738

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.