Evidence map›Paper›PMID 34846848›Full record

ArticleACS sensors2021

β-Sheet Richness of the Circulating Tumor-Derived Extracellular Vesicles for Noninvasive Pancreatic Cancer Screening.

Komila Rasuleva, Santhalingam Elamurugan, Aaron Bauer, Mdrakibhasan Khan, Qian Wen, Zhaofan Li, Preston Steen, Ang Guo, Wenjie Xia, Sijo Mathew and 2 more

Open access · greenAbstract read
In one paragraph

Article in ACS sensors, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Microfluidic Approaches for Affinity-Based Exosome Separation.International journal of molecular sciences · 2022
    Review
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Komila RasulevaDepartment of Electrical and Computer Engineering, North Dakota State University, 1411 Centennial Blvd., 101S, Fargo, North Dakota 58102, United States.
Santhalingam ElamuruganBiomedical Engineering Program, North Dakota State University, 1401 Centennial Blvd, Engineering Administration, Room 203, Fargo, North Dakota 58102, United States.
Aaron BauerBiomedical Engineering Program, North Dakota State University, 1401 Centennial Blvd, Engineering Administration, Room 203, Fargo, North Dakota 58102, United States.
Mdrakibhasan KhanDepartment of Electrical and Computer Engineering, North Dakota State University, 1411 Centennial Blvd., 101S, Fargo, North Dakota 58102, United States.
Qian WenDepartment of Statistics, North Dakota State University, 1230 Albrecht Blvd, Fargo, North Dakota 58102, United States.
Zhaofan LiDepartment of Civil, Construction and Environmental Engineering, North Dakota State University, 1410 North 14th Avenue, CIE 201, Fargo, North Dakota 58102, United States.
Preston SteenSanford Roger Maris Cancer Center, 820 4th Street N, Fargo, North Dakota 58122, United States.
Ang GuoDepartment of Pharmaceutical Sciences, North Dakota State University, 1401 Albrecht Blvd, Fargo, North Dakota 58102, United States.
Wenjie XiaDepartment of Civil, Construction and Environmental Engineering, North Dakota State University, 1410 North 14th Avenue, CIE 201, Fargo, North Dakota 58102, United States.ORCID 0000-0001-7870-0128
Sijo MathewDepartment of Pharmaceutical Sciences, North Dakota State University, 1401 Albrecht Blvd, Fargo, North Dakota 58102, United States.
Rick JansenDepartment of Public Health, North Dakota State University, 1455 14th Ave N, Fargo, North Dakota 58102, United States.
Dali SunDepartment of Electrical and Computer Engineering, North Dakota State University, 1411 Centennial Blvd., 101S, Fargo, North Dakota 58102, United States.ORCID 0000-0003-1691-2832
North Dakota State University · USFargo VA Health Care System · US

Funding

Targeting CLEC-2/podoplanin as a therapeutic strategy for pancreatic cancerP20GM109024 · NIGMS · NORTH DAKOTA STATE UNIVERSITY · PI Megan Orr · 2016 to 2026
$20.5M
Tracking and Evaluation CoreU54GM128729 · NIGMS · UNIVERSITY OF NORTH DAKOTA · PI BASSON, MARC D. · 2018 to 2022
$20.3M
Exosomal Contents Guided Amino Acids Treatment for Pancreatic CancerR21CA270748 · NCI · UNIVERSITY OF DENVER (COLORADO SEMINARY) · PI SUN, DALI · 2022 to 2023
$369k
Using the secondary structure (beta-sheet) of exosomal proteins for noninvasive pancreatic cancer detectionR03CA252783 · NCI · NORTH DAKOTA STATE UNIVERSITY · PI SUN, DALI · 2020 to 2020
$145k
NCI NIH HHS R03 CA252783NCI NIH HHS R21 CA270748NIGMS NIH HHS P20 GM109024NIGMS NIH HHS U54 GM128729
6 · The paper itself

Abstract

Tumor-derived extracellular vesicles (EVs) are under intensive study for their potential as noninvasive diagnosis biomarkers. Most EV-based cancer diagnostic assays trace supernumerary of a single cancer-associated marker or marker signatures. These types of biomarker assays are either subtype-specific or vulnerable to be masked by high background signals. In this study, we introduce using the β-sheet richness (BR) of the tumor-derived EVs as an effective way to discriminate EVs originating from malignant and nonmalignant cells, where EV contents are evaluated as a collective attribute rather than single factors. Circular dichroism, Fourier transform infrared spectroscopy, fluorescence staining assays, and a de novo workflow combining proteomics, bioinformatics, and protein folding simulations were employed to validate the collective attribute at both cellular and EV levels. Based on the BR of the tumorous EVs, we integrated immunoprecipitation and fluorescence labeling targeting the circulating tumor-derived EVs in serum and developed the process into a clinical assay, named EvIPThT. The assay can distinguish patients with and without malignant disease in a pilot cohort, with weak correlations to prognosis biomarkers, suggesting the potential for a cancer screening panel with existing prognostic biomarkers to improve overall performance.

Indexed as

Extracellular VesiclesPancreatic NeoplasmsBiomarkers, TumorEarly Detection of CancerHumansProtein Conformation, beta-StrandBiomarkers, Tumorcollective attributeextracellular vesiclesPDACprotein structureβ-sheet

Identifiers

PMID34846848
PMCPMC8715533
OpenAlexW3215830965

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.