Evidence map›Paper›PMID 34846772›Full record

ArticleChembiochem : a European journal of chemical biology2022

A Specialized Dehydrogenase Provides l-Phenyllactate for FR900359 Biosynthesis.

Sophie Klöppel, René Richarz, Daniel A Wirtz, Natalia Vasenda, Gabriele M König, Max Crüsemann

Open access · hybridAbstract read
In one paragraph

Article in Chembiochem : a European journal of chemical biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. A Building Block Approach for the Total Synthesis of YM-385781.European journal of organic chemistry · 2023
    Article
  2. A Specialized Dehydrogenase Provides l-Phenyllactate for FR900359 Biosynthesis.Chembiochem : a European journal of chemical biology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Sophie KlöppelInstitute of Pharmaceutical Biology, University of Bonn, Nussallee 6, 53115, Bonn, Germany.
René RicharzInstitute of Pharmaceutical Biology, University of Bonn, Nussallee 6, 53115, Bonn, Germany.
Daniel A WirtzInstitute of Pharmaceutical Biology, University of Bonn, Nussallee 6, 53115, Bonn, Germany.
Natalia VasendaInstitute of Pharmaceutical Biology, University of Bonn, Nussallee 6, 53115, Bonn, Germany.
Gabriele M KönigInstitute of Pharmaceutical Biology, University of Bonn, Nussallee 6, 53115, Bonn, Germany.
Max CrüsemannInstitute of Pharmaceutical Biology, University of Bonn, Nussallee 6, 53115, Bonn, Germany.ORCID 0000-0001-6660-2715
University of Bonn · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

d-Phenyllactate (PLA) is a component of the selective Gq protein inhibitor and nonribosomal cyclic depsipeptide FR900359 (FR). Here we report a detailed biochemical investigation of PLA biosynthesis and its incorporation into the natural product FR. The enzyme FrsC, member of the lactate/malate dehydrogenase superfamily, was shown to catalyze the formation of l-PLA from phenylpyruvate. FrsC was kinetically characterized and its substrate specificity determined. Incorporation of l-PLA was probed by assaying the adenylation domain FrsE-A3 and feeding studies with a Chromobacterium vaccinii ΔfrsC mutant, confirming preferred activation of l-PLA followed by on-line epimerization to d-PLA. Finally, detailed bioinformatic analyses of FrsC revealed its close relation to malate dehydrogenases from primary metabolism and suggest extensions in the substrate binding loop to be responsible for its adaptation to accepting larger aromatic substrates with high specificity.

Indexed as

DepsipeptidesLactatesL-Lactate DehydrogenasePolyestersDepsipeptidesFR900359LactatesL-Lactate DehydrogenasePolyestersbiosynthesisChromobacterium vacciniidehydrogenasenatural productsphenyllactic acid

Identifiers

PMID34846772
PMCPMC9299796
OpenAlexW3215875586

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.