Evidence map›Paper›PMID 34845335›Full record

ArticleThe ISME journal2022

Novel metabolic interactions and environmental conditions mediate the boreal peatmoss-cyanobacteria mutualism.

Alyssa A Carrell, Dušan Veličković, Travis J Lawrence, Benjamin P Bowen, Katherine B Louie, Dana L Carper, Rosalie K Chu, Hugh D Mitchell, Galya Orr, Lye Meng Markillie and 8 more

Abstract read
In one paragraph

Article in The ISME journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Alyssa A CarrellBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA.ORCID http://orcid.org/0000-0003-1142-4709
Dušan VeličkovićEnvironmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory, Richland, WA, 99352, USA.
Travis J LawrenceBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA.
Benjamin P BowenEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.ORCID http://orcid.org/0000-0003-1368-3958
Katherine B LouieDepartment of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Dana L CarperBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA.
Rosalie K ChuEnvironmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory, Richland, WA, 99352, USA.ORCID http://orcid.org/0000-0001-7428-7647
Hugh D MitchellEnvironmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory, Richland, WA, 99352, USA.
Galya OrrEnvironmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory, Richland, WA, 99352, USA.
Lye Meng MarkillieEnvironmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory, Richland, WA, 99352, USA.ORCID http://orcid.org/0000-0001-8275-4882
Sara S JawdyBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA.
Jane GrimwoodDepartment of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
A Jonathan ShawDepartment of Biology, Duke University, Durham, NC, 27708, USA.
Jeremy SchmutzDepartment of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.ORCID http://orcid.org/0000-0001-8062-9172
Trent R NorthenEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.ORCID http://orcid.org/0000-0001-8404-3259
Christopher R AndertonEnvironmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory, Richland, WA, 99352, USA.ORCID http://orcid.org/0000-0002-6170-1033
Dale A PelletierBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA.ORCID http://orcid.org/0000-0002-4321-7918
David J WestonBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA. westondj@ornl.gov.ORCID http://orcid.org/0000-0002-4794-9913

Funding

DOE | SC | Biological and Environmental Research (BER) DE-AC05-00R22725National Science Foundation (NSF) DEB-1737899
6 · The paper itself

Abstract

Interactions between Sphagnum (peat moss) and cyanobacteria play critical roles in terrestrial carbon and nitrogen cycling processes. Knowledge of the metabolites exchanged, the physiological processes involved, and the environmental conditions allowing the formation of symbiosis is important for a better understanding of the mechanisms underlying these interactions. In this study, we used a cross-feeding approach with spatially resolved metabolite profiling and metatranscriptomics to characterize the symbiosis between Sphagnum and Nostoc cyanobacteria. A pH gradient study revealed that the Sphagnum-Nostoc symbiosis was driven by pH, with mutualism occurring only at low pH. Metabolic cross-feeding studies along with spatially resolved matrix-assisted laser desorption/ionization mass spectrometry imaging (MALDI-MSI) identified trehalose as the main carbohydrate source released by Sphagnum, which were depleted by Nostoc along with sulfur-containing choline-O-sulfate, taurine and sulfoacetate. In exchange, Nostoc increased exudation of purines and amino acids. Metatranscriptome analysis indicated that Sphagnum host defense was downregulated when in direct contact with the Nostoc symbiont, but not as a result of chemical contact alone. The observations in this study elucidated environmental, metabolic, and physiological underpinnings of the widespread plant-cyanobacterial symbioses with important implications for predicting carbon and nitrogen cycling in peatland ecosystems as well as the basis of general host-microbe interactions.

Indexed as

NostocSymbiosisCarbonEcosystemNitrogenCarbonNitrogen

Identifiers

PMID34845335
PMCPMC8941135

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.