Evidence map›Paper›PMID 34844427›Full record

ArticlemBio2021

Broad Dissemination of Plasmids across Groundwater-Fed Rapid Sand Filter Microbiomes.

Rafael Pinilla-Redondo, Asmus Kalckar Olesen, Jakob Russel, Lisbeth Elvira de Vries, Lisbeth Damkjær Christensen, Sanin Musovic, Joseph Nesme, Søren Johannes Sørensen

Open access · goldAbstract read
In one paragraph

Article in mBio, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Rafael Pinilla-Redondo *Section of Microbiology, University of Copenhagen, Copenhagen, Denmark.
Asmus Kalckar Olesen *Section of Microbiology, University of Copenhagen, Copenhagen, Denmark.
Jakob RusselSection of Microbiology, University of Copenhagen, Copenhagen, Denmark.
Lisbeth Elvira de VriesDepartment of Technology, University College Copenhagen, Copenhagen, Denmark.
Lisbeth Damkjær ChristensenThe Danish Technological Institute, Taastrup, Denmark.
Sanin MusovicThe Danish Technological Institute, Taastrup, Denmark.
Joseph NesmeSection of Microbiology, University of Copenhagen, Copenhagen, Denmark.
Søren Johannes SørensenSection of Microbiology, University of Copenhagen, Copenhagen, Denmark.ORCID 0000-0001-6227-9906
University of Copenhagen · DKDanish Technological Institute · DKUniversity College Copenhagen · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Biological rapid sand filtration is a commonly employed method for the removal of organic and inorganic impurities in water which relies on the degradative properties of microorganisms for the removal of diverse contaminants, but their bioremediation capabilities vary greatly across waterworks. Bioaugmentation efforts with degradation-proficient bacteria have proven difficult due to the inability of the exogenous microbes to stably colonize the sand filters. Plasmids are extrachromosomal DNA elements that can often transfer between bacteria and facilitate the flow of genetic information across microbiomes, yet their ability to spread within rapid sand filters has remained unknown. Here, we examine the permissiveness of rapid sand filter communities toward four environmentally transmissible plasmids, RP4, RSF1010, pKJK5, and TOL (pWWO), using a dual-fluorescence bioreporter platform combined with fluorescence-activated cell sorting (FACS) and 16S rRNA gene amplicon sequencing. Our results reveal that plasmids can transfer at high frequencies and across distantly related taxa from rapid sand filter communities, emphasizing their potential suitability for introducing bioremediation determinants in the microbiomes of underperforming water purification plants.

Indexed as

Gene Transfer, HorizontalMicrobiotaBacteriaFiltrationGroundwaterHumansPhylogenyPlasmidsSilicon DioxideSilicon Dioxideconjugationhorizontal gene transfermicrobial communitiesmobile genetic elementsplasmidplasmid disseminationplasmid host rangeplasmid transferrapid sand filters

Identifiers

PMID34844427
PMCPMC8630534
OpenAlexW3216894786

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.