Evidence map›Paper›PMID 34843966›Full record

ArticleHeart rhythm2022

Developmental changes in cardiac expression of KCNQ1 and SCN5A spliceoforms: Implications for sudden unexpected infant death.

Alexandra F Williams, Audra F Bryan, Kelsey Tomasek, Carlos A Fulmer, Kyle Gregory, Cole Bozeman, Feng Li, Tarek S Absi, Yan Ru Su, Prince J Kannankeril

Open access · greenAbstract read
In one paragraph

Article in Heart rhythm, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Alexandra F WilliamsVanderbilt University School of Medicine, Nashville, Tennessee.
Audra F BryanVanderbilt University School of Medicine, Nashville, Tennessee.
Kelsey TomasekDepartment of Medicine, Vanderbilt University Medical Center, Nashville, Tennessee.
Carlos A FulmerDepartment of Medicine, Vanderbilt University Medical Center, Nashville, Tennessee.
Kyle GregoryDepartment of Medicine, Vanderbilt University Medical Center, Nashville, Tennessee.
Cole BozemanDepartment of Medicine, Vanderbilt University Medical Center, Nashville, Tennessee.
Feng LiForensic Medical Management Services, Nashville, Tennessee.
Tarek S AbsiDepartment of Medicine, Vanderbilt University Medical Center, Nashville, Tennessee.
Yan Ru SuDepartment of Medicine, Vanderbilt University Medical Center, Nashville, Tennessee.
Prince J KannankerilDepartment of Pediatrics, Vanderbilt University Medical Center, Nashville, Tennessee. Electronic address: prince.kannankeril@vumc.org.
Vanderbilt University Medical Center · USVanderbilt University · US

Funding

Vanderbilt Institute for Clinical and Translational Research (VICTR) -Identifying correlates of functional immunity in SARS-CoV-2 convalescent plasmaUL1TR002243 · NCATS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Paul A. Harris, Wesley H Self · 2017 to 2026
$130.7M
Role of Genetic Variants in Sudden Death in the YoungU01HL131911 · NHLBI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI KANNANKERIL, PRINCE JOSEPH · 2016 to 2019
$3.3M
NCATS NIH HHS UL1 TR002243NHLBI NIH HHS U01 HL131911
6 · The paper itself

Abstract

backgroundSudden unexpected infant death (SUID) occurs unpredictably and remains unexplained after scene investigation and autopsy. Approximately 1 in 7 cases of SUID can be related to a cardiac cause, and developmental regulation of cardiac ion channel genes may contribute to SUID.

objectiveThe goal of this study was to investigate the developmental changes in the spliceoforms of SCN5A and KCNQ1, 2 genes implicated in SUID.

methodsUsing reverse transcription quantitative real-time polymerase chain reaction, we quantified expression of SCN5A (adult and fetal) and KCNQ1 (KCNQ1a and b) spliceoforms in 153 human cardiac tissue samples from decedents that succumbed to SUID ("unexplained") and other known causes of death ("explained noncardiac").

resultsThere is a stepwise increase in the adult/fetal SCN5A spliceoform ratio from <2 months (4.55 ± 0.36; n = 51) through infancy and into adulthood (17.41 ± 3.33; n = 5). For KCNQ1, there is a decrease in the ratio of KCNQ1b to KCNQ1a between the <2-month (0.37 ± 0.02; n = 46) and the 2- to 4-month (0.28 ± 0.02; n = 52) age groups. When broken down by sex, race, or cause of death, there were no differences in SCN5A or KCNQ1 spliceoform expression, except for a higher ratio of KCNQ1b to KCNQ1a at 5-12 months of age for SUID females (0.40 ± 0.04; n = 9) than for males (0.25 ± 0.03; n = 6) and at <2 months of age for SUID white (0.42 ± 0.03; n = 19) than for black (0.33 ± 0.05; n = 9) infants.

conclusionThis study documents the developmental changes in SCN5A and KCNQ1 spliceoforms in humans. Our data suggest that spliceoform expression ratios change significantly throughout the first year of life.

Indexed as

KCNQ1 Potassium ChannelNAV1.5 Voltage-Gated Sodium ChannelSudden Infant DeathAdultDeath, Sudden, CardiacFemaleHumansInfantInfant, NewbornMaleMutationKCNQ1 Potassium ChannelKCNQ1 protein, humanNAV1.5 Voltage-Gated Sodium ChannelSCN5A protein, humanCardiac ion channelKCNQ1SCN5ASpliceoformSUID

Identifiers

PMID34843966
PMCPMC8977237
OpenAlexW3215001547

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.