Evidence map›Paper›PMID 34843606›Full record

ArticlePloS one2021

Genetic variability and population structure of Ethiopian chickpea (Cicer arietinum L.) germplasm.

Sintayehu Admas, Kassahun Tesfaye, Teklehaimanot Haileselassie, Eleni Shiferaw, K Colton Flynn

Abstract read
In one paragraph

Article in PloS one, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Sintayehu AdmasEthiopian Biodiversity Institute, Addis Ababa, Ethiopia.ORCID 0000-0002-4590-9555
Kassahun TesfayeCollege of Natural Sciences, Addis Ababa University, Addis Ababa, Ethiopia.ORCID 0000-0002-4046-4657
Teklehaimanot HaileselassieCollege of Natural Sciences, Addis Ababa University, Addis Ababa, Ethiopia.
Eleni ShiferawEthiopian Biodiversity Institute, Addis Ababa, Ethiopia.
K Colton FlynnGrassland Soil and Water Research Laboratory, USDA-ARS, Temple, Texas, United States of America.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Evaluation of the genetic diversity and an understanding of the genetic structure and relationships of chickpea genotypes are valuable to design efficient germplasm conservation strategies and crop breeding programs. Information is limited, in these regards, for Ethiopian chickpea germplasms. Therefore, the present study was carried out to estimate the genetic diversity, population structure, and relationships of 152 chickpea genotypes using simple sequence repeats (SSR) markers. Twenty three SSR markers exhibited polymorphism producing a total of 133 alleles, with a mean of 5.8 alleles per locus. Analyses utilizing various genetic-based statistics included pairwise population Nei's genetic distance, heterozygosity, Shannon's information index, polymorphic information content, and percent polymorphism. These analyses exemplified the existence of high genetic variation within and among chickpea genotypes. The 152 genotypes were divided into two major clusters based on Nei's genetic distances. The exotic genotypes were grouped in one cluster exclusively showing that these genotypes are distinct to Ethiopian genotypes, while the patterns of clustering of Ethiopian chickpea genotypes based on their geographic region were not consistent because of the seed exchange across regions. Model-based population structure clustering identified two discrete populations. These finding provides useful insight for chickpea collections and ex-situ conservation and national breeding programs for widening the genetic base of chickpea.

Indexed as

AllelesCicerDNA, PlantGenetic VariationGenome, PlantMicrosatellite RepeatsPlant BreedingPolymorphism, Single NucleotideDNA, Plant

Identifiers

PMID34843606
PMCPMC8629288

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.