Evidence map›Paper›PMID 34841480›Full record

ArticleEuropean radiology experimental2021

Creating a training set for artificial intelligence from initial segmentations of airways.

Ivan Dudurych, Antonio Garcia-Uceda, Zaigham Saghir, Harm A W M Tiddens, Rozemarijn Vliegenthart, Marleen de Bruijne

Open access · goldAbstract read
In one paragraph

Article in European radiology experimental, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Ivan DudurychDepartment of Radiology, University of Groningen, University Medical Centre Groningen, Groningen, Netherlands. i.dudurych@umcg.nl.ORCID 0000-0002-7747-156X
Antonio Garcia-UcedaDepartment of Radiology and Nuclear Medicine, Erasmus MC, Rotterdam, Netherlands.
Zaigham SaghirDepartment of Medicine, Section of Pulmonary Medicine, Herlev-Gentofte Hospital, Hellerup, Denmark.
Harm A W M TiddensDepartment of Radiology and Nuclear Medicine, Erasmus MC, Rotterdam, Netherlands.
Rozemarijn VliegenthartDepartment of Radiology, University of Groningen, University Medical Centre Groningen, Groningen, Netherlands.
Marleen de BruijneDepartment of Radiology and Nuclear Medicine, Erasmus MC, Rotterdam, Netherlands.
Erasmus MC · NLUniversity Medical Center Groningen · NLUniversity of Copenhagen · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Airways segmentation is important for research about pulmonary disease but require a large amount of time by trained specialists. We used an openly available software to improve airways segmentations obtained from an artificial intelligence (AI) tool and retrained the tool to get a better performance. Fifteen initial airway segmentations from low-dose chest computed tomography scans were obtained with a 3D-Unet AI tool previously trained on Danish Lung Cancer Screening Trial and Erasmus-MC Sophia datasets. Segmentations were manually corrected in 3D Slicer. The corrected airway segmentations were used to retrain the 3D-Unet. Airway measurements were automatically obtained and included count, airway length and luminal diameter per generation from the segmentations. Correcting segmentations required 2-4 h per scan. Manually corrected segmentations had more branches (p < 0.001), longer airways (p < 0.001) and smaller luminal diameters (p = 0.004) than initial segmentations. Segmentations from retrained 3D-Unets trended towards more branches and longer airways compared to the initial segmentations. The largest changes were seen in airways from 6th generation onwards. Manual correction results in significantly improved segmentations and is potentially a useful and time-efficient method to improve the AI tool performance on a specific hospital or research dataset.

Indexed as

Artificial IntelligenceLung NeoplasmsEarly Detection of CancerHumansSoftwareTomography, X-Ray ComputedArtificial intelligenceImage processing (computer-assisted)Respiratory systemThoraxTomography (x-ray computed)

Identifiers

PMID34841480
PMCPMC8627914
OpenAlexW3216019898

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.