Evidence map›Paper›PMID 34837509›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2022

Wheat genetic loci conferring resistance to stripe rust in the face of genetically diverse races of the fungus Puccinia striiformis f. sp. tritici.

Laura Bouvet, Lawrence Percival-Alwyn, Simon Berry, Paul Fenwick, Camila Campos Mantello, Rajiv Sharma, Sarah Holdgate, Ian J Mackay, James Cockram

Open access · hybridAbstract read
In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
6.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Genome-wide mapping of quantitative trait loci conferring resistance to stripe rust in spring wheat line PI 660072.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Laura BouvetNIAB, 93 Lawrence Weaver Road, Cambridge, CB3 0LE, UK.
Lawrence Percival-AlwynNIAB, 93 Lawrence Weaver Road, Cambridge, CB3 0LE, UK.
Simon BerryLimagrain UK Ltd, Market Rasen, LN7 6DT, UK.
Paul FenwickLimagrain UK Ltd, Market Rasen, LN7 6DT, UK.
Camila Campos MantelloNIAB, 93 Lawrence Weaver Road, Cambridge, CB3 0LE, UK.
Rajiv SharmaScotland's Rural College (SRUC), Kings Buildings, West Mains Road, Edinburgh, EH9 3JG, UK.
Sarah HoldgateNIAB, 93 Lawrence Weaver Road, Cambridge, CB3 0LE, UK.
Ian J MackayNIAB, 93 Lawrence Weaver Road, Cambridge, CB3 0LE, UK.
James CockramNIAB, 93 Lawrence Weaver Road, Cambridge, CB3 0LE, UK. james.cockram@niab.com.ORCID http://orcid.org/0000-0002-1014-6463
National Institute of Agricultural Botany · GBLimagrain (United Kingdom) · GBScotland's Rural College · GB

Funding

Biotechnology and Biological Sciences Research Council BB/N00518X/1Biotechnology and Biological Sciences Research Council Doctoral Training Parthership PhD
6 · The paper itself

Abstract

key messageAnalysis of a wheat multi-founder population identified 14 yellow rust resistance QTL. For three of the four most significant QTL, haplotype analysis indicated resistance alleles were rare in European wheat. Stripe rust, or yellow rust (YR), is a major fungal disease of wheat (Triticum aestivum) caused by Puccinia striiformis Westend f. sp. tritici (Pst). Since 2011, the historically clonal European Pst races have been superseded by the rapid incursion of genetically diverse lineages, reducing the resistance of varieties previously showing durable resistance. Identification of sources of genetic resistance to such races is a high priority for wheat breeding. Here we use a wheat eight-founder multi-parent population genotyped with a 90,000 feature single nucleotide polymorphism array to genetically map YR resistance to such new Pst races. Genetic analysis of five field trials at three UK sites identified 14 quantitative trait loci (QTL) conferring resistance. Of these, four highly significant loci were consistently identified across all test environments, located on chromosomes 1A (QYr.niab-1A.1), 2A (QYr.niab-2A.1), 2B (QYr.niab-2B.1) and 2D (QYr.niab-2D.1), together explaining ~ 50% of the phenotypic variation. Analysis of these four QTL in two-way and three-way combinations showed combinations conferred greater resistance than single QTL, and genetic markers were developed that distinguished resistant and susceptible alleles. Haplotype analysis in a collection of wheat varieties found that the haplotypes associated with YR resistance at three of these four major loci were rare (≤ 7%) in European wheat, highlighting their potential utility for future targeted improvement of disease resistance. Notably, the physical interval for QTL QYr.niab-2B.1 contained five nucleotide-binding leucine-rich repeat candidate genes with integrated BED domains, of which two corresponded to the cloned resistance genes Yr7 and Yr5/YrSp.

Indexed as

Disease ResistanceGenotypePlant DiseasesPolymorphism, Single NucleotidePucciniaQuantitative Trait LociTriticum

Identifiers

PMID34837509
PMCPMC8741662
OpenAlexW3214976550

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.