Evidence map›Paper›PMID 34834993›Full record

ArticleViruses2021

Development of a Novel Loop Mediated Isothermal Amplification Assay (LAMP) for the Rapid Detection of Epizootic Haemorrhagic Disease Virus.

Paulina Rajko-Nenow, Emma L A Howson, Duncan Clark, Natasha Hilton, Aruna Ambagala, Nicholas Svitek, John Flannery, Carrie Batten

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.7field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Paulina Rajko-NenowThe Pirbright Institute, Ash Road, Pirbright GU24 0NF, UK.
Emma L A HowsonThe Pirbright Institute, Ash Road, Pirbright GU24 0NF, UK.ORCID 0000-0002-4993-1901
Duncan ClarkOptiGene Limited, Blatchford Road, Horsham RH13 5QR, UK.
Natasha HiltonOptiGene Limited, Blatchford Road, Horsham RH13 5QR, UK.
Aruna AmbagalaNational Center for Foreign Animal Disease, Canadian Food Inspection Agency, 1015 Arlington Street, Winnipeg, MB R3G 1Y5, Canada.
Nicholas SvitekInternatonal Livestock Research Institute, Nairobi P.O. Box 30709, Kenya.ORCID 0000-0002-4539-5806
John FlanneryThe Pirbright Institute, Ash Road, Pirbright GU24 0NF, UK.ORCID 0000-0002-5012-2829
Carrie BattenThe Pirbright Institute, Ash Road, Pirbright GU24 0NF, UK.ORCID 0000-0003-4274-7375
The Pirbright Institute · GBBlatchford (United Kingdom) · GBCanadian Food Inspection Agency · CAInternational Livestock Research Institute · KE

Funding

Biotechnology and Biological Sciences Research Council BBS/E/I/00007030Biotechnology and Biological Sciences Research Council BBS/E/I/00007033Biotechnology and Biological Sciences Research Council BBS/E/I/00007036Biotechnology and Biological Sciences Research Council BBS/E/I/00007037
6 · The paper itself

Abstract

Epizootic haemorragic disease (EHD) is an important disease of white-tailed deer and can cause a bluetongue-like illness in cattle. A definitive diagnosis of EHD relies on molecular assays such as real-time RT-qPCR or conventional PCR. Reverse transcription loop-mediated isothermal amplification (RT-LAMP) is a cost-effective, specific, and sensitive technique that provides an alternative to RT-qPCR. We designed two sets of specific primers targeting segment-9 of the EHD virus genome to enable the detection of western and eastern topotypes, and evaluated their performance in singleplex and multiplex formats using cell culture isolates (n = 43), field specimens (n = 20), and a proficiency panel (n = 10). The limit of detection of the eastern and western RT-LAMP assays was estimated as ~24.36 C

Indexed as

AnimalsBluetongueCattleDeerDNA PrimersHemorrhagic Disease Virus, EpizooticMolecular Diagnostic TechniquesNucleic Acid Amplification TechniquesReal-Time Polymerase Chain ReactionReoviridae InfectionsReverse TranscriptionRNA, ViralSensitivity and SpecificityDNA PrimersRNA, ViralAB 7500 fast instrumentEHDVmultiplex LAMPrapid diagnosticsRT-LAMP

Identifiers

PMID34834993
PMCPMC8621080
OpenAlexW3209160211

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.