Evidence map›Paper›PMID 34834954›Full record

ArticleViruses2021

Evaluating Large Spontaneous Deletions in a Bovine Cell Line Selected for Bovine Viral Diarrhea Virus Resistance.

Aspen M Workman, Michael P Heaton, Dennis A Webster, Gregory P Harhay, Theodore S Kalbfleisch, Timothy P L Smith, Shollie M Falkenberg, Daniel F Carlson, Tad S Sonstegard

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Primary Cells from aViruses · 2025
    Article
  3. Article
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Aspen M WorkmanUS Meat Animal Research Center, United States Department of Agriculture, Agricultural Research Service, Clay Center, NE 68901, USA.ORCID 0000-0003-2852-3519
Michael P HeatonUS Meat Animal Research Center, United States Department of Agriculture, Agricultural Research Service, Clay Center, NE 68901, USA.ORCID 0000-0003-1386-1208
Dennis A WebsterRecombinetics Inc., Eagan, MN 55121, USA.
Gregory P HarhayUS Meat Animal Research Center, United States Department of Agriculture, Agricultural Research Service, Clay Center, NE 68901, USA.
Theodore S KalbfleischGluck Equine Research Center, Department of Veterinary Science, University of Kentucky, Lexington, KY 40506, USA.
Timothy P L SmithUS Meat Animal Research Center, United States Department of Agriculture, Agricultural Research Service, Clay Center, NE 68901, USA.ORCID 0000-0003-1611-6828
Shollie M FalkenbergNational Animal Disease Center, United States Department of Agriculture, Agricultural Research Service, Ames, IA 50010, USA.
Daniel F CarlsonRecombinetics Inc., Eagan, MN 55121, USA.
Tad S SonstegardAcceligen Inc., Eagan, MN 55121, USA.
Agricultural Research Service · USRecombinetics (United States) · USUniversity of Kentucky · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bovine viral diarrhea virus's (BVDV) entry into bovine cells involves attachment of virions to cellular receptors, internalization, and pH-dependent fusion with endosomal membranes. The primary host receptor for BVDV is CD46; however, the complete set of host factors required for virus entry is unknown. The Madin-Darby bovine kidney (MDBK) cell line is susceptible to BVDV infection, while a derivative cell line (CRIB) is resistant at the level of virus entry. We performed complete genome sequencing of each to identify genomic variation underlying the resistant phenotype with the aim of identifying host factors essential for BVDV entry. Three large compound deletions in the BVDV-resistant CRIB cell line were identified and predicted to disrupt the function or expression of the genes

Indexed as

Cell LineGene DeletionAnimalsCRISPR-Cas SystemsDiarrheaDiarrhea Viruses, Bovine ViralDogsGene Knockout TechniquesGTPase-Activating ProteinsNerve Tissue ProteinsProtein Tyrosine Phosphatase, Non-Receptor Type 12Receptors, GlutamateVirus InternalizationVirus ReplicationWhole Genome SequencingGTPase-Activating ProteinsNerve Tissue ProteinsProtein Tyrosine Phosphatase, Non-Receptor Type 12Receptors, GlutamateBVDVCRIBCRISPRGRID2MDBKPTPN12RABGAP1L

Identifiers

PMID34834954
PMCPMC8622392
OpenAlexW3208209043

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.