Evidence map›Paper›PMID 34834925›Full record

ArticleViruses2021

Insertion of Exogenous Genes within the

Yanjie Du, Teng Liu, Yifeng Qin, Qinting Dong, Ying Chen, Kang Ouyang, Zuzhang Wei, Weijian Huang

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.2field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 3 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Yanjie DuCollege of Animal Science and Technology, Guangxi University, No. 100 Daxue Road, Nanning 530005, China.
Teng LiuCollege of Animal Science and Technology, Guangxi University, No. 100 Daxue Road, Nanning 530005, China.
Yifeng QinCollege of Animal Science and Technology, Guangxi University, No. 100 Daxue Road, Nanning 530005, China.
Qinting DongCollege of Animal Science and Technology, Guangxi University, No. 100 Daxue Road, Nanning 530005, China.
Ying ChenCollege of Animal Science and Technology, Guangxi University, No. 100 Daxue Road, Nanning 530005, China.
Kang OuyangCollege of Animal Science and Technology, Guangxi University, No. 100 Daxue Road, Nanning 530005, China.
Zuzhang WeiCollege of Animal Science and Technology, Guangxi University, No. 100 Daxue Road, Nanning 530005, China.ORCID 0000-0002-6317-2315
Weijian HuangCollege of Animal Science and Technology, Guangxi University, No. 100 Daxue Road, Nanning 530005, China.
Guangxi University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A tagged or reporter astrovirus can be a valuable tool for the analysis of various aspects of the virus life cycle, and to aid in the development of genetically engineered astroviruses as vectors. Here, transposon-mediated insertion mutagenesis was used to insert a 15-nucleotide (nt) sequence into random sites of open reading frame 1a (ORF1a) based on an infectious full-length cDNA clone of porcine astrovirus (PAstV). Five sites in the predicted coiled-coil structures (CC), genome-linked protein (VPg), and hypervariable region (HVR) in ORF1a of the PAstV genome were identified that could tolerate random 15 nt insertions. Incorporation of the commonly used epitope tags, His, Flag, and HA, into four of the five insertion sites permitted the production of infectious viruses and allowed recognition by specifically tagged monoclonal antibodies. The results of immuno-fluorescent assays showed that Flag-tagged ORF1a protein overlapped partially with capsid and ORF2b proteins in the cytoplasm. Improved light-oxygen-voltage (iLOV) gene was also introduced at the insertion sites of CC, VPg, and HVR. Only one viable recombinant reporter PAstV expressing iLOV inserted in HVR was recovered. Biological analysis of the reporter virus showed that it displayed similar growth characteristics, and yet produced less infectious virus particles, when compared with the parental virus. The recombinant virus carrying the iLOV fused with the HVR of ORF1a protein maintained its stability and showed green fluorescence after 15 passages in cell cultures. The resultant fluorescently tagged virus could provide a promising tool for the rapid screening of antiviral drugs as well as allowing the visualization of PAstV infection and replication in living cells.

Indexed as

Mutagenesis, InsertionalOpen Reading FramesAnimalsAstroviridae InfectionsCell LineGenome, ViralMamastrovirusSwineSwine DiseasesViral ProteinsVirus ReplicationViral ProteinsastrovirusDNA-launched infectious clonesHVRiLOVPASTV-GX1tagtransposons

Identifiers

PMID34834925
PMCPMC8623754
OpenAlexW3206526015

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.