Evidence map›Paper›PMID 34834762›Full record

ArticlePlants (Basel, Switzerland)2021

Methods of In Situ Quantitative Root Biology.

Taras Pasternak, José Manuel Pérez-Pérez

Open access · goldAbstract read
In one paragraph

Article in Plants (Basel, Switzerland), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.3field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 2 countries.

Taras PasternakCentre for BioSystems Analysis, BIOSS Centre for Biological Signalling Studies University of Freiburg, Institute of Biology II/Molecular Plant Physiology, 79104 Freiburg, Germany.ORCID 0000-0001-5061-4076
José Manuel Pérez-PérezInstituto de Bioingeniería, Universidad Miguel Hernández, 03202 Elche, Spain.ORCID 0000-0003-2848-4919
Universitat de Miguel Hernández d'Elx · ESUniversity of Freiburg · DE

Funding

Bundesministerium für Bildung und Forschung DFG26068018Conselleria d'Educació, Cultura i Sport of the Generalitat Valenciana IDIFEDER 2018/016 and PROMETEO/2019/117European Regional Development Fund BIO2015-64255-R, RTI2018-096505-B-I00, and IDIFEDER 2018/016Ministerio de Ciencia e Innovación of Spain BIO2015-64255-R and RTI2018-096505-B-I00
6 · The paper itself

Abstract

When dealing with plant roots, a multiscale description of the functional root structure is needed. Since the beginning of 21st century, new devices such as laser confocal microscopes have been accessible for coarse root structure measurements, including three-dimensional (3D) reconstruction. Most researchers are familiar with using simple 2D geometry visualization that does not allow quantitative determination of key morphological features from an organ-like perspective. We provide here a detailed description of the quantitative methods available for 3D analysis of root features at single-cell resolution, including root asymmetry, lateral root analysis, cell size and nuclear organization, cell-cycle kinetics, and chromatin structure analysis. Quantitative maps of the root apical meristem (RAM) are shown for different species, including

Indexed as

cell cyclechromatin organizationlateral root (LR)nuclear structureroot apical meristem (RAM)

Identifiers

PMID34834762
PMCPMC8625443
OpenAlexW3212847657

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.