Evidence map›Paper›PMID 34833588›Full record

ArticleSensors (Basel, Switzerland)2021

Detecting Animal Contacts-A Deep Learning-Based Pig Detection and Tracking Approach for the Quantification of Social Contacts.

Martin Wutke, Felix Heinrich, Pronaya Prosun Das, Anita Lange, Maria Gentz, Imke Traulsen, Friederike K Warns, Armin Otto Schmitt, Mehmet Gültas

Abstract read
In one paragraph

Article in Sensors (Basel, Switzerland), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Article
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  4. Review
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  12. Detection of Pig Movement and Aggression Using Deep Learning Approaches.Animals : an open access journal from MDPI · 2023
    Article
  13. Sensors and Robotics for Digital Agriculture.Sensors (Basel, Switzerland) · 2023
    Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Review
  19. Study on Poultry Pose Estimation Based on Multi-Parts Detection.Animals : an open access journal from MDPI · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Martin WutkeBreeding Informatics Group, Department of Animal Sciences, Georg-August University, Margarethe von Wrangell-Weg 7, 37075 Göttingen, Germany.ORCID 0000-0001-7839-2751
Felix HeinrichBreeding Informatics Group, Department of Animal Sciences, Georg-August University, Margarethe von Wrangell-Weg 7, 37075 Göttingen, Germany.ORCID 0000-0002-6093-8522
Pronaya Prosun DasBioinformatics Group, Fraunhofer Institute for Toxicology and Experimental Medicine (Fraunhofer ITEM), Nikolai-Fuchs-Str. 1, 30625 Hannover, Germany.ORCID 0000-0003-0165-5167
Anita LangeLivestock Systems, Department of Animal Sciences, Georg-August University, Albrecht-Thaer-Weg 3, 37075 Göttingen, Germany.ORCID 0000-0003-3240-6286
Maria GentzLivestock Systems, Department of Animal Sciences, Georg-August University, Albrecht-Thaer-Weg 3, 37075 Göttingen, Germany.ORCID 0000-0002-4769-9539
Imke TraulsenLivestock Systems, Department of Animal Sciences, Georg-August University, Albrecht-Thaer-Weg 3, 37075 Göttingen, Germany.ORCID 0000-0001-9761-0291
Friederike K WarnsAgricultural Test and Education Centre House Düsse, Chamber of Agriculture North Rhine-Westphalia, Haus Düsse 2, 59505 Bad Sassendorf, Germany.
Armin Otto SchmittBreeding Informatics Group, Department of Animal Sciences, Georg-August University, Margarethe von Wrangell-Weg 7, 37075 Göttingen, Germany.ORCID 0000-0002-4910-9467
Mehmet GültasCenter for Integrated Breeding Research (CiBreed), Georg-August University, Albrecht-Thaer-Weg 3, 37075 Göttingen, Germany.ORCID 0000-0003-3297-3192

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The identification of social interactions is of fundamental importance for animal behavioral studies, addressing numerous problems like investigating the influence of social hierarchical structures or the drivers of agonistic behavioral disorders. However, the majority of previous studies often rely on manual determination of the number and types of social encounters by direct observation which requires a large amount of personnel and economical efforts. To overcome this limitation and increase research efficiency and, thus, contribute to animal welfare in the long term, we propose in this study a framework for the automated identification of social contacts. In this framework, we apply a convolutional neural network (CNN) to detect the location and orientation of pigs within a video and track their movement trajectories over a period of time using a Kalman filter (KF) algorithm. Based on the tracking information, we automatically identify social contacts in the form of head-head and head-tail contacts. Moreover, by using the individual animal IDs, we construct a network of social contacts as the final output. We evaluated the performance of our framework based on two distinct test sets for pig detection and tracking. Consequently, we achieved a Sensitivity, Precision, and F1-score of 94.2%, 95.4%, and 95.1%, respectively, and a MOTA score of 94.4%. The findings of this study demonstrate the effectiveness of our keypoint-based tracking-by-detection strategy and can be applied to enhance animal monitoring systems.

Indexed as

Deep LearningAlgorithmsAnimalsAnimal WelfareMovementNeural Networks, ComputerSwineconvolutional neural networkKalman filterpig detectionpig trackingprecision livestock farming

Identifiers

PMID34833588
PMCPMC8619108

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.