Evidence map›Paper›PMID 34831008›Full record

ArticleCancers2021

Identification of a Distinct miRNA Regulatory Network in the Tumor Microenvironment of Transformed Mycosis Fungoides.

Cosimo Di Raimondo, Zhen Han, Chingyu Su, Xiwei Wu, Hanjun Qin, James F Sanchez, Yate-Ching Yuan, Xochiquetzal Martinez, Farah Abdulla, Jasmine Zain and 3 more

Open access · goldAbstract read
In one paragraph

Article in Cancers, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 2 countries.

Cosimo Di RaimondoDivision of Dermatology, City of Hope, Duarte, CA 91010, USA.ORCID 0000-0003-4691-9381
Zhen HanDivision of Dermatology, City of Hope, Duarte, CA 91010, USA.
Chingyu SuDivision of Dermatology, City of Hope, Duarte, CA 91010, USA.
Xiwei WuDepartment of Molecular and Cellular Biology, City of Hope, Duarte, CA 91010, USA.
Hanjun QinDepartment of Molecular and Cellular Biology, City of Hope, Duarte, CA 91010, USA.
James F SanchezBeckman Research Institute, City of Hope, Duarte, CA 91010, USA.
Yate-Ching YuanDepartment of Computational Quantitative Medicine, City of Hope, Duarte, CA 91010, USA.ORCID 0000-0002-3698-9784
Xochiquetzal MartinezDivision of Dermatology, City of Hope, Duarte, CA 91010, USA.
Farah AbdullaDivision of Dermatology, City of Hope, Duarte, CA 91010, USA.
Jasmine ZainDepartment of Hematology and Hematopoietic Cell Transplantation, City of Hope, Duarte, CA 91010, USA.
Chun-Wei ChenBeckman Research Institute, City of Hope, Duarte, CA 91010, USA.ORCID 0000-0002-8737-6830
Steven T RosenBeckman Research Institute, City of Hope, Duarte, CA 91010, USA.
Christiane QuerfeldDivision of Dermatology, City of Hope, Duarte, CA 91010, USA.ORCID 0000-0001-9698-5809
City of Hope · USUniversity of Rome Tor Vergata · IT

Funding

Transplant for Lymphoma:Therapy-Related LeukemiaP50CA107399 · NCI · CITY OF HOPE/BECKMAN RESEARCH INSTITUTE · PI KWAK, LARRY W · 2004 to 2022
$35.5M
Cutaneous T cell lymphoma: a paradigm for dissecting susceptibility and resistance to checkpoint inhibition therapyR01CA229510 · NCI · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI QUERFELD, CHRISTIANE · 2019 to 2023
$2.8M
NCI NIH HHS P50 CA107399NCI NIH HHS R01 CA229510NIH/NCI Cancer Center Support Grant; NIH/NCI grant P30CA033572; R01 CA229510-01
6 · The paper itself

Abstract

Large cell transformation of mycosis fungoides (LCT-MF) occurs in 20-50% of advanced MF and is generally associated with poor response and dismal prognosis. Although different mechanisms have been proposed to explain the pathogenesis, little is known about the role of microRNAs (miRs) in transcriptional regulation of LCT-MF. Here, we investigated the miR and mRNA expression profile in lesional skin samples of patients with LCT-MF and non-LCT MF using RNA-seq analysis. We found miR-146a and miR-21 to be significantly upregulated, and miR-708 the most significantly downregulated miR in LCT-MF. Integration of miR and mRNA expression profiles revealed the miR-regulated networks in LCT-MF. Ingenuity pathway analysis (IPA) demonstrated the involvement of genes for ICOS-ICOSL, PD1-PDL1, NF-κB, E2F transcription, and molecular mechanisms of cancer signaling pathways. Quantitative real time (qRT)-PCR results of target genes were consistent with the RNA-seq data. We further identified the immunosuppressive tumor microenvironment (TME) in LCT-MF. Moreover, our data indicated that miR-146a, -21 and -708 are associated with the immunosuppressive TME in LCT-MF. Collectively, our results suggest that the key LCT-MF associated miRs and their regulated networks may provide insights into its pathogenesis and identify promising targets for novel therapeutic strategies.

Indexed as

cutaneous T-cell lymphoma (CTCL)large cell transformation of mycosis fungoides (LCT-MF)miR regulatory networkmycosis fungoides (MF)tumor immune microenvironment

Identifiers

PMID34831008
PMCPMC8616450
OpenAlexW3217355515

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.