Evidence map›Paper›PMID 34828894›Full record

ArticleFoods (Basel, Switzerland)2021

Development of a DNA Metabarcoding Method for the Identification of Bivalve Species in Seafood Products.

Kristina Gense, Verena Peterseil, Alma Licina, Martin Wagner, Margit Cichna-Markl, Stefanie Dobrovolny, Rupert Hochegger

Abstract read
In one paragraph

Article in Foods (Basel, Switzerland), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Kristina GenseAustrian Competence Centre for Feed and Food Quality, Safety and Innovation, FFoQSI GmbH, Technopark 1, 3430 Tulln an der Donau, Austria.
Verena PeterseilAustrian Agency for Health and Food Safety (AGES), Institute for Food Safety, Department of Molecular Biology and Microbiology, Spargelfeldstr. 191, 1220 Vienna, Austria.
Alma LicinaLVA GmbH, Magdeburggasse 10, 3400 Klosterneuburg, Austria.
Martin WagnerAustrian Competence Centre for Feed and Food Quality, Safety and Innovation, FFoQSI GmbH, Technopark 1, 3430 Tulln an der Donau, Austria.
Margit Cichna-MarklDepartment of Analytical Chemistry, Faculty of Chemistry, University of Vienna, Währinger Straße 38, 1090 Vienna, Austria.ORCID 0000-0001-8699-674X
Stefanie DobrovolnyAustrian Agency for Health and Food Safety (AGES), Institute for Food Safety, Department of Molecular Biology and Microbiology, Spargelfeldstr. 191, 1220 Vienna, Austria.
Rupert HocheggerAustrian Agency for Health and Food Safety (AGES), Institute for Food Safety, Department of Molecular Biology and Microbiology, Spargelfeldstr. 191, 1220 Vienna, Austria.ORCID 0000-0002-9792-7616

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The production of bivalve species has been increasing in the last decades. In spite of strict requirements for species declaration, incorrect labelling of bivalve products has repeatedly been detected. We present a DNA metabarcoding method allowing the identification of bivalve species belonging to the bivalve families Mytilidae (mussels), Pectinidae (scallops), and Ostreidae (oysters) in foodstuffs. The method, developed on Illumina instruments, targets a 150 bp fragment of mitochondrial 16S rDNA. We designed seven primers (three primers for mussel species, two primers for scallop species and a primer pair for oyster species) and combined them in a triplex PCR assay. In each of eleven reference samples, the bivalve species was identified correctly. In ten DNA extract mixtures, not only the main component (97.0-98.0%) but also the minor components (0.5-1.5%) were detected correctly, with only a few exceptions. The DNA metabarcoding method was found to be applicable to complex and processed foodstuffs, allowing the identification of bivalves in, e.g., marinated form, in sauces, in seafood mixes and even in instant noodle seafood. The method is highly suitable for food authentication in routine analysis, in particular in combination with a DNA metabarcoding method for mammalian and poultry species published recently.

Indexed as

bivalvesDNA metabarcodingfood authenticationmitochondrial 16S rDNAMytilidaenext generation sequencingOstreidaePectinidaeseafoodspecies identification

Identifiers

PMID34828894
PMCPMC8617786

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.