Evidence map›Paper›PMID 34828393›Full record

ArticleGenes2021

Integrated Analysis Reveals a lncRNA-miRNA-mRNA Network Associated with Pigeon Skeletal Muscle Development.

Tao Zhang, Can Chen, Shushu Han, Lan Chen, Hao Ding, Yueyue Lin, Genxi Zhang, Kaizhou Xie, Jinyu Wang, Guojun Dai

Open access · goldAbstract read
In one paragraph

Article in Genes, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.8field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Veterinary sciences · 2026
    Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Identification of miRNA Associated withInternational journal of molecular sciences · 2023
    Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Tao ZhangCollege of Animal Science and Technology, Yangzhou University, Yangzhou 225009, China.ORCID 0000-0003-1170-1622
Can ChenCollege of Animal Science and Technology, Yangzhou University, Yangzhou 225009, China.
Shushu HanShandong Chengwu County Animal Husbandry Service Center, Department of Agriculture and Rural Affairs of Heze City, Heze 274200, China.
Lan ChenJoint International Research Laboratory of Agriculture and Agri-Product Safety of Ministry of Education of China, College of Animal Science and Technology, Yangzhou University, Yangzhou 225009, China.
Hao DingCollege of Animal Science and Technology, Yangzhou University, Yangzhou 225009, China.ORCID 0000-0003-0991-1532
Yueyue LinCollege of Animal Science and Technology, Yangzhou University, Yangzhou 225009, China.
Genxi ZhangCollege of Animal Science and Technology, Yangzhou University, Yangzhou 225009, China.
Kaizhou XieJoint International Research Laboratory of Agriculture and Agri-Product Safety of Ministry of Education of China, College of Animal Science and Technology, Yangzhou University, Yangzhou 225009, China.
Jinyu WangCollege of Animal Science and Technology, Yangzhou University, Yangzhou 225009, China.
Guojun DaiCollege of Animal Science and Technology, Yangzhou University, Yangzhou 225009, China.
Yangzhou University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Growing evidence has demonstrated the emerging role of long non-coding RNA as competitive endogenous RNA (ceRNA) in regulating skeletal muscle development. However, the mechanism of ceRNA regulated by lncRNA in pigeon skeletal muscle development remains unclear. To reveal the function and regulatory mechanisms of lncRNA, we first analyzed the expression profiles of lncRNA, microRNA (miRNA), and mRNA during the development of pigeon skeletal muscle using high-throughput sequencing. We then constructed a lncRNA-miRNA-mRNA ceRNA network based on differentially expressed (DE) lncRNAs, miRNAs, and mRNAs according to the ceRNA hypothesis. Functional enrichment and short time-series expression miner (STEM) analysis were performed to explore the function of the ceRNA network. Hub lncRNA-miRNA-mRNA interactions were identified by connectivity degree and validated using dual-luciferase activity assay. The results showed that a total of 1625 DE lncRNAs, 11,311 DE mRNAs, and 573 DE miRNAs were identified. A ceRNA network containing 9120 lncRNA-miRNA-mRNA interactions was constructed. STEM analysis indicated that the function of the lncRNA-associated ceRNA network might be developmental specific. Functional enrichment analysis identified potential pathways regulating pigeon skeletal muscle development, such as cell cycle and MAPK signaling. Based on the connectivity degree, lncRNAs

Indexed as

AnimalsAvian ProteinsColumbidaeGene Expression Regulation, DevelopmentalGene Regulatory NetworksMicroRNAsMuscle DevelopmentMuscle, SkeletalRNA, Long NoncodingRNA, MessengerTranscriptomeAvian ProteinsMicroRNAsRNA, Long NoncodingRNA, MessengerceRNA networklncRNAmiRNApigeonskeletal muscle development

Identifiers

PMID34828393
PMCPMC8625974
OpenAlexW3211534811

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.