Evidence map›Paper›PMID 34827564›Full record

ArticleBiomolecules2021

Auto-Regulation of Transcription and Translation: Oscillations, Excitability and Intermittency.

Philip J Murray, Eleonore Ocana, Hedda A Meijer, Jacqueline Kim Dale

Open access · goldAbstract read
In one paragraph

Article in Biomolecules, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 50% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Philip J MurraySchool of Science and Engineering, University of Dundee, Dundee DD1 4HN, UK.ORCID 0000-0003-0332-5356
Eleonore OcanaSchool of Science and Engineering, University of Dundee, Dundee DD1 4HN, UK.
Hedda A MeijerSchool of Life Sciences, University of Dundee, Dundee DD1 5EH, UK.ORCID 0000-0001-6695-4956
Jacqueline Kim DaleSchool of Life Sciences, University of Dundee, Dundee DD1 5EH, UK.ORCID 0000-0002-9294-947X
University of Dundee · GB

Funding

Medical Research Council MR/S008705/1
6 · The paper itself

Abstract

Several members of the Hes/Her family, conserved targets of the Notch signalling pathway, encode transcriptional repressors that dimerise, bind DNA and self-repress. Such autoinhibition of transcription can yield homeostasis and, in the presence of delays that account for processes such as transcription, splicing and transport, oscillations. Whilst previous models of autoinhibition of transcription have tended to treat processes such as translation as being unregulated (and hence linear), here we develop and explore a mathematical model that considers autoinhibition of transcription together with nonlinear regulation of translation. It is demonstrated that such a model can yield, in the absence of delays, nonlinear dynamical behaviours such as excitability, homeostasis, oscillations and intermittency. These results indicate that regulation of translation as well as transcription allows for a much richer range of behaviours than is possible with autoregulation of transcription alone. A number of experiments are suggested that would that allow for the signature of autoregulation of translation as well as transcription to be experimentally detected in a Notch signalling system.

Indexed as

Protein BiosynthesisTranscription, GeneticAnimalsGene Expression RegulationHomeostasisHumansReceptors, NotchSignal TransductionReceptors, Notchexcitableintermittencymathematical modeloscillatorypost transcriptional regulationthresholdtranslation

Identifiers

PMID34827564
PMCPMC8615617
OpenAlexW3208703128

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.