Evidence map›Paper›PMID 34826179›Full record

ArticleHuman brain mapping2022

Connectivity-based parcellation of normal and anatomically distorted human cerebral cortex.

Stephane Doyen, Peter Nicholas, Anujan Poologaindran, Lewis Crawford, Isabella M Young, Rafeael Romero-Garcia, Michael E Sughrue

Open access · goldAbstract read
In one paragraph

Article in Human brain mapping, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
5.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 53 citations in OpenAlex.

  1. Review
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  10. Intrinsic and Microenvironmental Drivers of Glioblastoma Invasion.International journal of molecular sciences · 2024
    Review
  11. Article
  12. Article
  13. Functional connectivity reveals different brain networks underlying the idiopathic foreign accent syndrome.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2023
    Article
  14. Automatic brain structure segmentation forQuantitative imaging in medicine and surgery · 2023
    Article
  15. Article
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  18. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Stephane DoyenOmniscient Neurotechnology, Sydney, New South Wales, Australia.
Peter NicholasOmniscient Neurotechnology, Sydney, New South Wales, Australia.
Anujan PoologaindranBrain Mapping Unit, Department of Psychiatry, University of Cambridge, Cambridge, UK.
Lewis CrawfordOmniscient Neurotechnology, Sydney, New South Wales, Australia.ORCID 0000-0003-2231-5196
Isabella M YoungOmniscient Neurotechnology, Sydney, New South Wales, Australia.ORCID 0000-0001-7639-6679
Rafeael Romero-GarciaBrain Mapping Unit, Department of Psychiatry, University of Cambridge, Cambridge, UK.ORCID 0000-0002-5199-4573
Michael E SughrueOmniscient Neurotechnology, Sydney, New South Wales, Australia.ORCID 0000-0001-5407-2585
Neuroscience Research Australia · AUMRC Cognition and Brain Sciences Unit · GBTuring Institute · GB

Funding

FUNCTION BIRNU24RR021992 · NCRR · UNIVERSITY OF CALIFORNIA-IRVINE · PI POTKIN, STEVEN G · 2006 to 2010
$25.0M
Transcranial Direct Current Stimulation for Treatment of Auditory Verbal HalluciP20GM103472 · NIGMS · THE MIND RESEARCH NETWORK · PI BEDRICK, EDWARD J · 2012 to 2017
$14.3M
NEURAL MECHANISMS OF SCHIZOPHRENIAP20RR021938 · NCRR · THE MIND RESEARCH NETWORK · PI HANLON, FAITH MARIE · 2008 to 2011
$9.4M
Brain Glutamate and Outcome in SchizophreniaR01MH084898 · NIMH · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI BUSTILLO, JUAN RICARDO · 2009 to 2013
$1.7M
NCRR NIH HHS P20 RR021938NCRR NIH HHS U24 RR021992NCRR NIH HHS U24-RR021992NIGMS NIH HHS P20 GM103472NIH HHS 5P20RR021938/P20GM103472NIMH NIH HHS R01 MH084898NIMH NIH HHS R01MH084898-01A1
6 · The paper itself

Abstract

For over a century, neuroscientists have been working toward parcellating the human cortex into distinct neurobiological regions. Modern technologies offer many parcellation methods for healthy cortices acquired through magnetic resonance imaging. However, these methods are suboptimal for personalized neurosurgical application given that pathology and resection distort the cerebrum. We sought to overcome this problem by developing a novel connectivity-based parcellation approach that can be applied at the single-subject level. Utilizing normative diffusion data, we first developed a machine-learning (ML) classifier to learn the typical structural connectivity patterns of healthy subjects. Specifically, the Glasser HCP atlas was utilized as a prior to calculate the streamline connectivity between each voxel and each parcel of the atlas. Using the resultant feature vector, we determined the parcel identity of each voxel in neurosurgical patients (n = 40) and thereby iteratively adjusted the prior. This approach enabled us to create patient-specific maps independent of brain shape and pathological distortion. The supervised ML classifier re-parcellated an average of 2.65% of cortical voxels across a healthy dataset (n = 178) and an average of 5.5% in neurosurgical patients. Our patient dataset consisted of subjects with supratentorial infiltrating gliomas operated on by the senior author who then assessed the validity and practical utility of the re-parcellated diffusion data. We demonstrate a rapid and effective ML parcellation approach to parcellation of the human cortex during anatomical distortion. Our approach overcomes limitations of indiscriminately applying atlas-based registration from healthy subjects by employing a voxel-wise connectivity approach based on individual data.

Indexed as

Cerebral CortexDiffusion Tensor ImagingGliomaHumansImage Processing, Computer-AssistedMachine LearningNerve NetconnectivityDTIgliomamachine learningparcellationtractography

Identifiers

PMID34826179
PMCPMC8837585
OpenAlexW3215445294

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.