Evidence map›Paper›PMID 34825349›Full record

ArticlePlant molecular biology2022

Agrobacterium-mediated cassava transformation for the Asian elite variety KU50.

Yoshinori Utsumi, Chikako Utsumi, Maho Tanaka, Yoshie Okamoto, Satoshi Takahashi, Tong Thi Huong, Anh Vu Nguyen, Nguyen Van Dong, Hiroki Tokunaga, Nigel Taylor and 1 more

Abstract read
PubMed Publisher
In one paragraph

Article in Plant molecular biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 3 countries.

Yoshinori UtsumiRIKEN Center for Sustainable Resource Science, Plant Genomic Network Research Team, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa, 230-0045, Japan. yoshinori.utsumi@riken.jp.ORCID http://orcid.org/0000-0002-9196-7123
Chikako UtsumiRIKEN Center for Sustainable Resource Science, Plant Genomic Network Research Team, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa, 230-0045, Japan.
Maho TanakaRIKEN Center for Sustainable Resource Science, Plant Genomic Network Research Team, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa, 230-0045, Japan.
Yoshie OkamotoRIKEN Center for Sustainable Resource Science, Plant Genomic Network Research Team, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa, 230-0045, Japan.
Satoshi TakahashiRIKEN Center for Sustainable Resource Science, Plant Genomic Network Research Team, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa, 230-0045, Japan.
Tong Thi HuongAgricultural Genetic Institute, Km 2, Pham Van Dong Road, Tuliem, Hanoi, Vietnam.
Anh Vu NguyenAgricultural Genetic Institute, Km 2, Pham Van Dong Road, Tuliem, Hanoi, Vietnam.
Nguyen Van DongAgricultural Genetic Institute, Km 2, Pham Van Dong Road, Tuliem, Hanoi, Vietnam.
Hiroki TokunagaRIKEN Center for Sustainable Resource Science, Plant Genomic Network Research Team, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa, 230-0045, Japan.
Nigel TaylorDonald Danforth Plant Science Center, St. Louis, MO, 63132, USA.
Motoaki SekiRIKEN Center for Sustainable Resource Science, Plant Genomic Network Research Team, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa, 230-0045, Japan. motoaki.seki@riken.jp.
RIKEN Center for Sustainable Resource Science · JPAgricultural Genetics Institute · VNDonald Danforth Plant Science Center · USKihara Institute for Biological Research · JP

Funding

science and technology research partnership for sustainable development JPMJSA1508
6 · The paper itself

Abstract

key messageCassava genetic transformation has mostly been reported for African cassava varieties, but not for Asian varieties. This is the first report of cassava transformation in Asian elite varieties using friable embryogenic calli. Agrobacterium-mediated cassava transformation via friable embryogenic calli (FEC) has enabled the robust production of transgenic cassava. So far, mostly the model cassava variety 60444 and African varieties have been transformed because of their good production and regeneration from embryogenic tissues. It is important to develop transformation methods for elite Asian cassava varieties to meet the changing needs in one of the world's major cassava production areas. However, a suitable transformation method for the Asian elite variety Kasetsart 50 (KU50) has not been developed. Here, we report a transformation method for KU50, the cultivar with the highest planting area in Thailand and Vietnam. In cassava transformation, the preparation of FEC as the target tissue for transgene integration is a key step. FEC induction from KU50 was improved by using media with reduced nutrients and excess vitamin B1, and somatic embryo and plant regeneration optimized by manipulation of naphthalene acetic acid (NAA), and benzylamino purine (BAP). The transformation efficiency for KU50 was 22%, approximately half that of 60444 at 45%. Transcriptome analysis indicated that the expression of genes related to cell-wall loosening was upregulated in FEC from KU50 compared with 60444, indicating that cell-wall production and assembly were disproportionate in the Asian variety. The transformation system for KU50 reported here will contribute to the molecular breeding of cassava plants for Asian farmers using transgenic and genome-editing technologies.

Indexed as

ManihotAgrobacteriumPlants, Genetically ModifiedTransformation, GeneticTransgenesAsian elite varietyCassavaFECKU50Transformation

Identifiers

PMID34825349
OpenAlexW3215554952

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.