Evidence map›Paper›PMID 34824485›Full record

ArticleParallel computing2020

Multiscale modeling and cinematic visualization of photosynthetic energy conversion processes from electronic to cell scales.

Melih Sener, Stuart Levy, John E Stone, A J Christensen, Barry Isralewitz, Robert Patterson, Kalina Borkiewicz, Jeffrey Carpenter, C Neil Hunter, Zaida Luthey-Schulten and 1 more

Open access · greenAbstract read
In one paragraph

Article in Parallel computing, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Review
  3. #COVIDisAirborne: AI-enabled multiscale computational microscopy of delta SARS-CoV-2 in a respiratory aerosol.The international journal of high performance computing applications · 2023
    Article
  4. Article
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  6. Lessons Learned from Responsive Molecular Dynamics Studies of the COVID-19 Virus.Proceedings of UrgentHPC 2021 : the Third International Workshop on HPC for Urgent Decision Making · 2021
    Article
  7. ANARI: A 3-D Rendering API Standard.Computing in science & engineering
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Melih SenerBeckman Institute, University of Illinois at Urbana-Champaign.
Stuart Levy *Advanced Visualization Laboratory, NCSA, University of Illinois at Urbana-Champaign.
John E Stone *Beckman Institute, University of Illinois at Urbana-Champaign.
A J ChristensenAdvanced Visualization Laboratory, NCSA, University of Illinois at Urbana-Champaign.
Barry IsralewitzBeckman Institute, University of Illinois at Urbana-Champaign.
Robert PattersonAdvanced Visualization Laboratory, NCSA, University of Illinois at Urbana-Champaign.
Kalina BorkiewiczAdvanced Visualization Laboratory, NCSA, University of Illinois at Urbana-Champaign.
Jeffrey CarpenterAdvanced Visualization Laboratory, NCSA, University of Illinois at Urbana-Champaign.
C Neil HunterDepartment of Molecular Biology and Biotechnology, University of Sheffield, Sheffield, U.K.
Zaida Luthey-SchultenDepartment of Chemistry, University of Illinois at Urbana-Champaign.
Donna CoxBeckman Institute, University of Illinois at Urbana-Champaign.
University of Illinois Urbana-Champaign · US

Funding

WHOLE CELL SIMULATIONP41GM104601 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI TAJKHORSHID, EMAD · 2012 to 2021
$19.0M
Commodity Hardware Acceleration of Popular Modeling Software for Structural BioloR01GM098243 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI SCHULTEN, KLAUS · 2011 to 2014
$1.2M
Biotechnology and Biological Sciences Research Council BB/M000265/1NIGMS NIH HHS P41 GM104601NIGMS NIH HHS R01 GM098243
6 · The paper itself

Abstract

Conversion of sunlight into chemical energy, namely photosynthesis, is the primary energy source of life on Earth. A visualization depicting this process, based on multiscale computational models from electronic to cell scales, is presented in the form of an excerpt from the fulldome show

Identifiers

PMID34824485
PMCPMC8612599
OpenAlexW3112201810

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.