Evidence map›Paper›PMID 34824357›Full record

ArticleCommunications biology2021

Cycloalkane-modified amphiphilic polymers provide direct extraction of membrane proteins for CryoEM analysis.

Anna J Higgins, Alex J Flynn, Anaïs Marconnet, Laura J Musgrove, Vincent L G Postis, Jonathan D Lippiat, Chun-Wa Chung, Tom Ceska, Manuela Zoonens, Frank Sobott and 1 more

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Communications biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Review
  3. Advances in native cell membrane nanoparticles system.Current opinion in structural biology · 2025
    Review
  4. Review
  5. Amphiphilic Copolymers and Their Role in the Study of Membrane Proteins.The journal of physical chemistry letters · 2025
    Review
  6. Review
  7. Deciphering the language of mingling lipids and proteins.Current opinion in structural biology · 2025
    Review
  8. Article
  9. Discovery of Therapeutic Antibodies Targeting Complex Multi-Spanning Membrane Proteins.BioDrugs : clinical immunotherapeutics, biopharmaceuticals and gene therapy · 2024
    Review
  10. Article
  11. Structures and membrane interactions of native serotonin transporter in complexes with psychostimulants.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  12. Article
  13. Article
  14. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 5 countries.

Anna J Higgins *School of Biomedical Sciences, Faculty of Biological Sciences & Astbury Centre for Structural and Molecular Biology, University of Leeds, Leeds, LS2 9JT, UK.
Alex J Flynn *School of Biomedical Sciences, Faculty of Biological Sciences & Astbury Centre for Structural and Molecular Biology, University of Leeds, Leeds, LS2 9JT, UK.
Anaïs MarconnetUniversité de Paris, Laboratoire de Biologie Physico-Chimique des Protéines Membranaires, CNRS, UMR 7099, F-75005, Paris, France.
Laura J MusgroveSchool of Biomedical Sciences, Faculty of Biological Sciences & Astbury Centre for Structural and Molecular Biology, University of Leeds, Leeds, LS2 9JT, UK.
Vincent L G PostisSchool of Biomedical Sciences, Faculty of Biological Sciences & Astbury Centre for Structural and Molecular Biology, University of Leeds, Leeds, LS2 9JT, UK.
Jonathan D LippiatSchool of Biomedical Sciences, Faculty of Biological Sciences & Astbury Centre for Structural and Molecular Biology, University of Leeds, Leeds, LS2 9JT, UK.ORCID http://orcid.org/0000-0003-3748-7345
Chun-Wa ChungGlaxoSmithKline, Gunnels Wood Road, Stevenage, SG1 2NY, UK.
Tom CeskaUCB Pharma, Slough, SL1 3WE, UK.ORCID http://orcid.org/0000-0002-7200-9528
Manuela ZoonensUniversité de Paris, Laboratoire de Biologie Physico-Chimique des Protéines Membranaires, CNRS, UMR 7099, F-75005, Paris, France. zoonens@ibpc.fr.ORCID http://orcid.org/0000-0003-2648-7868
Frank SobottSchool of Molecular and Cellular Biology, Faculty of Biological Sciences & Astbury Centre for Structural and Molecular Biology, University of Leeds, Leeds, LS2 9JT, UK. f.sobott@leeds.ac.uk.ORCID http://orcid.org/0000-0001-9029-1865
Stephen P MuenchSchool of Biomedical Sciences, Faculty of Biological Sciences & Astbury Centre for Structural and Molecular Biology, University of Leeds, Leeds, LS2 9JT, UK. s.p.muench@leeds.ac.uk.ORCID http://orcid.org/0000-0001-6869-4414
University of Leeds · GBUniversité Paris Cité · FRGlaxoSmithKline (Netherlands) · NLUCB Pharma (Belgium) · BE

Funding

RCUK | Biotechnology and Biological Sciences Research Council (BBSRC) BB/R018561/1/Wellcome TrustWellcome Trust 108466/Z/15/Z
6 · The paper itself

Abstract

Membrane proteins are essential for cellular growth, signalling and homeostasis, making up a large proportion of therapeutic targets. However, the necessity for a solubilising agent to extract them from the membrane creates challenges in their structural and functional study. Although amphipols have been very effective for single-particle electron cryo-microscopy (cryoEM) and mass spectrometry, they rely on initial detergent extraction before exchange into the amphipol environment. Therefore, circumventing this pre-requirement would be a big advantage. Here we use an alternative type of amphipol: a cycloalkane-modified amphiphile polymer (CyclAPol) to extract Escherichia coli AcrB directly from the membrane and demonstrate that the protein can be isolated in a one-step purification with the resultant cryoEM structure achieving 3.2 Å resolution. Together this work shows that cycloalkane amphipols provide a powerful approach for the study of membrane proteins, allowing native extraction and high-resolution structure determination by cryoEM.

Indexed as

ATP-Binding Cassette, Sub-Family C ProteinsCryoelectron MicroscopyCycloparaffinsEscherichia coliEscherichia coli ProteinsPolymersAcrB protein, E coliATP-Binding Cassette, Sub-Family C ProteinsCycloparaffinsEscherichia coli ProteinsPolymers

Identifiers

PMID34824357
PMCPMC8617058
OpenAlexW3118904407

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.