Evidence map›Paper›PMID 34824241›Full record

ArticleNature communications2021

Interaction of two MADS-box genes leads to growth phenotype divergence of all-flesh type of tomatoes.

Baowen Huang, Guojian Hu, Keke Wang, Pierre Frasse, Elie Maza, Anis Djari, Wei Deng, Julien Pirrello, Vincent Burlat, Clara Pons and 4 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
3.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 56 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. SlPLT6 controls ripening initiation and quality traits through modulation of histone acetylation and methylation in tomato.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  6. Article
  7. Molecular breeding of tomato: Advances and challenges.Journal of integrative plant biology · 2025
    Review
  8. Ethylene response factor SlERF.D6 promotes ripening in part through transcription factors SlDEAR2 and SlTCP12.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  9. Article
  10. Article
  11. Genome-Wide Association Study of Grape Texture Based on Puncture.International journal of molecular sciences · 2024
    Article
  12. Article
  13. Article
  14. Article
  15. Horticulture research · 2024
    Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 3 countries.

Baowen Huang *Université de Toulouse, INRAe/INP Toulouse, UMR990 Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole, Castanet-Tolosan, F-31326, France.ORCID http://orcid.org/0000-0001-6815-9438
Guojian Hu *Université de Toulouse, INRAe/INP Toulouse, UMR990 Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole, Castanet-Tolosan, F-31326, France.ORCID http://orcid.org/0000-0002-7358-7805
Keke WangUniversité de Toulouse, INRAe/INP Toulouse, UMR990 Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole, Castanet-Tolosan, F-31326, France.
Pierre FrasseUniversité de Toulouse, INRAe/INP Toulouse, UMR990 Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole, Castanet-Tolosan, F-31326, France.
Elie MazaUniversité de Toulouse, INRAe/INP Toulouse, UMR990 Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole, Castanet-Tolosan, F-31326, France.ORCID http://orcid.org/0000-0002-7351-6345
Anis DjariUniversité de Toulouse, INRAe/INP Toulouse, UMR990 Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole, Castanet-Tolosan, F-31326, France.ORCID http://orcid.org/0000-0002-9093-440X
Wei DengKey Laboratory of Plant Hormones and Development Regulation of Chongqing, School of Life Sciences, Chongqing University, 401331, Chongqing, China.
Julien PirrelloUniversité de Toulouse, INRAe/INP Toulouse, UMR990 Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole, Castanet-Tolosan, F-31326, France.
Vincent BurlatLaboratoire de Recherche en Sciences Végétales - UMR5546, Université de Toulouse, CNRS, UPS, Toulouse, INP, France.ORCID http://orcid.org/0000-0002-0897-6011
Clara PonsInstituto de Biología Molecular y Cellular de Plantas, Consejo Superior de Investigaciones Cientificas- Universidad Politécnica de Valencia, 46022, Valencia, Spain.ORCID http://orcid.org/0000-0002-8296-2937
Antonio GranellInstituto de Biología Molecular y Cellular de Plantas, Consejo Superior de Investigaciones Cientificas- Universidad Politécnica de Valencia, 46022, Valencia, Spain.
Zhengguo LiKey Laboratory of Plant Hormones and Development Regulation of Chongqing, School of Life Sciences, Chongqing University, 401331, Chongqing, China. zhengguoli@cqu.edu.cn.ORCID http://orcid.org/0000-0001-7019-2560
Benoît van der RestUniversité de Toulouse, INRAe/INP Toulouse, UMR990 Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole, Castanet-Tolosan, F-31326, France. benoit.van-der-rest@ensat.fr.ORCID http://orcid.org/0000-0002-2058-6788
Mondher BouzayenUniversité de Toulouse, INRAe/INP Toulouse, UMR990 Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole, Castanet-Tolosan, F-31326, France. bouzayen@ensat.fr.ORCID http://orcid.org/0000-0001-7630-1449
Centre National de la Recherche Scientifique · FRChongqing University · CNConsejo Superior de Investigaciones Científicas · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

All-flesh tomato cultivars are devoid of locular gel and exhibit enhanced firmness and improved postharvest storage. Here, we show that SlMBP3 is a master regulator of locular tissue in tomato fruit and that a deletion at the gene locus underpins the All-flesh trait. Intriguingly, All-flesh varieties lack the deleterious phenotypes reported previously for SlMBP3 under-expressing lines and which preclude any potential commercial use. We resolve the causal factor for this phenotypic divergence through the discovery of a natural mutation at the SlAGL11 locus, a close homolog of SlMBP3. Misexpressing SlMBP3 impairs locular gel formation through massive transcriptomic reprogramming at initial phases of fruit development. SlMBP3 influences locule gel formation by controlling cell cycle and cell expansion genes, indicating that important components of fruit softening are determined at early pre-ripening stages. Our findings define potential breeding targets for improved texture in tomato and possibly other fleshy fruits.

Indexed as

Cell ProliferationCell WallFruitGene Expression ProfilingGene Expression Regulation, PlantGenetic VariationMADS Domain ProteinsMutationPhenotypePlant ProteinsSolanum lycopersicumMADS Domain ProteinsPlant Proteins

Identifiers

PMID34824241
PMCPMC8616914
OpenAlexW3216525821

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.