Evidence map›Paper›PMID 34824227›Full record

ArticleNature communications2021

Reprogramming microbial populations using a programmed lysis system to improve chemical production.

Wenwen Diao, Liang Guo, Qiang Ding, Cong Gao, Guipeng Hu, Xiulai Chen, Yang Li, Linpei Zhang, Wei Chen, Jian Chen and 1 more

Abstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Wenwen DiaoState Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi, 214122, China.ORCID http://orcid.org/0000-0001-5233-5759
Liang GuoState Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi, 214122, China.
Qiang DingState Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi, 214122, China.
Cong GaoState Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi, 214122, China.
Guipeng HuState Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi, 214122, China.
Xiulai ChenState Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi, 214122, China.ORCID http://orcid.org/0000-0002-9749-4558
Yang LiState Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi, 214122, China.
Linpei ZhangKey Laboratory of Industrial Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi, 214122, China.
Wei ChenState Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi, 214122, China.
Jian ChenKey Laboratory of Industrial Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi, 214122, China.
Liming LiuState Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi, 214122, China. mingll@jiangnan.edu.cn.ORCID http://orcid.org/0000-0003-3022-936X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microbial populations are a promising model for achieving microbial cooperation to produce valuable chemicals. However, regulating the phenotypic structure of microbial populations remains challenging. In this study, a programmed lysis system (PLS) is developed to reprogram microbial cooperation to enhance chemical production. First, a colicin M -based lysis unit is constructed to lyse Escherichia coli. Then, a programmed switch, based on proteases, is designed to regulate the effective lysis unit time. Next, a PLS is constructed for chemical production by combining the lysis unit with a programmed switch. As a result, poly (lactate-co-3-hydroxybutyrate) production is switched from PLH synthesis to PLH release, and the content of free PLH is increased by 283%. Furthermore, butyrate production with E. coli consortia is switched from E. coli BUT003 to E. coli BUT004, thereby increasing butyrate production to 41.61 g/L. These results indicate the applicability of engineered microbial populations for improving the metabolic division of labor to increase the efficiency of microbial cell factories.

Indexed as

BacteriolysisButyratesColicinsEscherichia coliMetabolic EngineeringMicrobial ConsortiaPeptide HydrolasesPolyestersProtein Sorting SignalsSynthetic BiologyButyratesColicinsPeptide HydrolasesPolyesterspoly(lactate-co-3-hydroxybutyrate)Protein Sorting Signals

Identifiers

PMID34824227
PMCPMC8617184

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.