Evidence map›Paper›PMID 34822415›Full record

ArticleMetabolites2021

Grapevine and Wine Metabolomics-Based Guidelines for FAIR Data and Metadata Management.

Stefania Savoi, Panagiotis Arapitsas, Éric Duchêne, Maria Nikolantonaki, Ignacio Ontañón, Silvia Carlin, Florian Schwander, Régis D Gougeon, António César Silva Ferreira, Georgios Theodoridis and 5 more

Abstract read
In one paragraph

Article in Metabolites, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. A Metabolome Atlas of Grape Biodiversity.Journal of agricultural and food chemistry · 2026
    Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Flint glass bottles cause white wine aroma identity degradation.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Stefania SavoiUMR AGAP, Montpellier University, CIRAD, INRAE, Institut Agro-Montpellier SupAgro, 34060 Montpellier, France.ORCID 0000-0002-2665-223X
Panagiotis ArapitsasDepartment of Food Quality and Nutrition, Edmund Mach Foundation, Research and Innovation Centre, Via Edmund Mach 1, 38010 San Michele all'Adige, Italy.ORCID 0000-0002-9378-9287
Éric DuchêneSVQV, University of Strasbourg, INRAE, F-68000 Colmar, France.
Maria NikolantonakiUMR PAM Université de Bourgogne/Agro Sup Dijon, Institut Universitaire de la Vigne et du Vin, Jules Guyot, F-21000 Dijon, France.ORCID 0000-0002-5576-9373
Ignacio OntañónLaboratorio de Análisis Del Aroma y Enología, Departamento de Química Analítica, Facultad de Ciencias, Instituto Agroalimentario de Aragón (IA2), Universidad de Zaragoza, Calle de Pedro Cerbuna 12, 50009 Zaragoza, Spain.ORCID 0000-0002-3348-0843
Silvia CarlinDepartment of Food Quality and Nutrition, Edmund Mach Foundation, Research and Innovation Centre, Via Edmund Mach 1, 38010 San Michele all'Adige, Italy.ORCID 0000-0003-0398-6947
Florian SchwanderJulius Kühn-Institute, Institute for Grapevine Breeding Geilweilerhof, D-76833 Siebeldingen, Germany.ORCID 0000-0002-0790-6118
Régis D GougeonUMR PAM Université de Bourgogne/Agro Sup Dijon, Institut Universitaire de la Vigne et du Vin, Jules Guyot, F-21000 Dijon, France.ORCID 0000-0002-5371-5523
António César Silva FerreiraCBQF-Centro de Biotecnologia e Química Fina.-Laboratório Associado, Escola Superior de Biotecnologia, Universidade Católica Portuguesa, Rua de Diogo Botelho, 1327, 4169-005 Porto, Portugal.
Georgios TheodoridisLaboratory of Analytical Chemistry, Department of Chemistry, Aristotle University of Thessaloniki, 54124 Thessaloniki, Greece.ORCID 0000-0002-2015-108X
Reinhard TöpferJulius Kühn-Institute, Institute for Grapevine Breeding Geilweilerhof, D-76833 Siebeldingen, Germany.ORCID 0000-0003-1569-2495
Urska VrhovsekDepartment of Food Quality and Nutrition, Edmund Mach Foundation, Research and Innovation Centre, Via Edmund Mach 1, 38010 San Michele all'Adige, Italy.
Anne-Francoise Adam-BlondonUniversité Paris-Saclay, INRAE, URGI, 78026 Versailles, France.ORCID 0000-0002-3412-9086
Mario PezzottiDepartment of Biotechnology, University of Verona, 37134 Verona, Italy.
Fulvio MattiviDepartment of Food Quality and Nutrition, Edmund Mach Foundation, Research and Innovation Centre, Via Edmund Mach 1, 38010 San Michele all'Adige, Italy.ORCID 0000-0003-4935-5876

Funding

European Cooperation in Science and Technology CA 17111 INTEGRAPE
6 · The paper itself

Abstract

In the era of big and omics data, good organization, management, and description of experimental data are crucial for achieving high-quality datasets. This, in turn, is essential for the export of robust results, to publish reliable papers, make data more easily available, and unlock the huge potential of data reuse. Lately, more and more journals now require authors to share data and metadata according to the FAIR (Findable, Accessible, Interoperable, Reusable) principles. This work aims to provide a step-by-step guideline for the FAIR data and metadata management specific to grapevine and wine science. In detail, the guidelines include recommendations for the organization of data and metadata regarding (i) meaningful information on experimental design and phenotyping, (ii) sample collection, (iii) sample preparation, (iv) chemotype analysis, (v) data analysis (vi) metabolite annotation, and (vii) basic ontologies. We hope that these guidelines will be helpful for the grapevine and wine metabolomics community and that it will benefit from the true potential of data usage in creating new knowledge being revealed.

Indexed as

chromatographymass spectrometrymetabolitesomicsopen-dataplantsVitiswine

Identifiers

PMID34822415
PMCPMC8618349

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.