Evidence map›Paper›PMID 34820714›Full record

ArticlePlant cell reports2022

Genome-wide analysis of BURP genes and identification of a BURP-V gene RcBURP4 in Rosa chinensis.

Lufeng Fu, Zhujun Zhang, Hai Wang, Xiaojuan Zhao, Lin Su, Lifang Geng, Yizeng Lu, Boqiang Tong, Qinghua Liu, Xinqiang Jiang

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Article in Plant cell reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

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0cells of the map it votes in
6citing papers in PubMed
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1 · What the graph read from it

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

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3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Review
  3. Genome-Wide Analysis of BURP Domain-Containing Gene Family inInternational journal of molecular sciences · 2024
    Article
  4. Genome-wide identification and expression analysis of the BURP domain-containing genes inPhysiology and molecular biology of plants : an international journal of functional plant biology · 2023
    Article
  5. Article
  6. Article
4 · The record

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5 · Who and what money

Authors and funding

10 authors.

Lufeng Fu *College of Landscape Architecture and Forestry, Qingdao Agricultural University, Qingdao, 266000, China.
Zhujun Zhang *College of Landscape Architecture and Forestry, Qingdao Agricultural University, Qingdao, 266000, China.
Hai WangCollege of Landscape, Beijing Forestry University, Beijing, 100083, China.
Xiaojuan ZhaoCollege of Landscape Architecture and Forestry, Qingdao Agricultural University, Qingdao, 266000, China.
Lin SuCollege of Landscape Architecture and Forestry, Qingdao Agricultural University, Qingdao, 266000, China.
Lifang GengCollege of Landscape Architecture and Forestry, Qingdao Agricultural University, Qingdao, 266000, China.
Yizeng LuShandong Provincial Center of Forest Tree Germplasm Resources, Jinan, 250102, China.
Boqiang TongShandong Provincial Center of Forest Tree Germplasm Resources, Jinan, 250102, China.
Qinghua LiuCollege of Landscape Architecture and Forestry, Qingdao Agricultural University, Qingdao, 266000, China. horticultural8@163.com.
Xinqiang JiangCollege of Landscape Architecture and Forestry, Qingdao Agricultural University, Qingdao, 266000, China. jiangxinqiang8@163.com.ORCID http://orcid.org/0000-0003-0727-3354

Funding

Innovative Program for Graduate Student of Qingdao Agricultural University QNYCX20031National Key Research and Development Program of China 2018YFD1000400
6 · The paper itself

Abstract

key messageNine RcBURPs have been identified in Rosa chinensis, and overexpression of RcBURP4 increased ABA, NaCl sensitivity, and drought tolerance in transgenic Arabidopsis. BURP proteins are unique to plants and may contribute greatly to growth, development, and stress responses of plants. Despite the vital role of BURP proteins, little is known about these proteins in rose (Rosa spp.). In the present study, nine genes belonging to the BURP family in R. chinensis were identified using multiple bioinformatic approaches against the rose genome database. The nine RcBURPs, with diverse structures, were located on all chromosomes of the rose genome, except for Chr2 and Chr3. Phylogenic analysis revealed that these RcBURPs can be classified into eight subfamilies, including BNM2-like, PG1β-like, USP-like, RD22-like, BURP-V, BURP-VI, BURP-VII, and BURP-VIII. Conserved motif and exon-intron analyses indicated a conserved pattern within the same subfamily. The presumed cis-regulatory elements (CREs) within the promoter region of each RcBURP were analyzed and the results showed that all RcBURPs contained different types of CREs, including abiotic stress-, light response-, phytohormones response-, and plant growth and development-related CREs. Transcriptomic analysis revealed that a BURP-V member, RcBURP4, was induced in rose leaves and roots under mild and severe drought treatments. We then overexpressed RcBURP4 in Arabidopsis and examined its role under abscisic acid (ABA), NaCl, polyethylene glycol (PEG), and drought treatments. Nine stress-responsive genes expression were changed in RcBURP4-overexpressing leaves and roots. Furthermore, RcBURP4-silenced rose plants exhibited decreased tolerance to dehydration. The results obtained from this study provide the first comprehensive overview of RcBURPs and highlight the importance of RcBURP4 in rose plant.

Indexed as

PhylogenyAbscisic AcidArabidopsisChromosome MappingDroughtsGene Expression Regulation, PlantGenome-Wide Association StudyGerminationPlant ProteinsPlants, Genetically ModifiedPolyethylene GlycolsRegulatory Sequences, Nucleic AcidRosaSalinitySodium ChlorideStress, PhysiologicalAbscisic AcidPlant ProteinsPolyethylene GlycolsSodium ChlorideAbiotic stressesBURPsRcBURP4Rosa chinensis

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.