Evidence map›Paper›PMID 34819672›Full record

ArticleNature2021

The human microbiome encodes resistance to the antidiabetic drug acarbose.

Jared Balaich, Michael Estrella, Guojun Wu, Philip D Jeffrey, Abhishek Biswas, Liping Zhao, Alexei Korennykh, Mohamed S Donia

Open access · greenAbstract read
In one paragraph

Article in Nature, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed, 3 pooled it
5.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 3 syntheses or guidelines pooled it, 82 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Roles of the gut microbiome in weight management.Nature reviews. Microbiology · 2023
    Pooled it
  4. Trial
  5. Review
  6. Gut microbes · 2026
    Article
  7. Review
  8. Review
  9. Review
  10. Review
  11. Guangdong Biobank Cohort (GDBC) study.European journal of epidemiology · 2026
    Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Jared BalaichDepartment of Molecular Biology, Princeton University, Princeton, NJ, USA.
Michael EstrellaDepartment of Molecular Biology, Princeton University, Princeton, NJ, USA.ORCID http://orcid.org/0000-0002-1721-9418
Guojun WuCenter for Microbiome, Nutrition, and Health, New Jersey Institute for Food, Nutrition, and Health, Department of Biochemistry and Microbiology, Rutgers University, New Brunswick, NJ, USA.ORCID http://orcid.org/0000-0002-7910-2813
Philip D JeffreyDepartment of Molecular Biology, Princeton University, Princeton, NJ, USA.
Abhishek BiswasDepartment of Molecular Biology, Princeton University, Princeton, NJ, USA.
Liping ZhaoCenter for Microbiome, Nutrition, and Health, New Jersey Institute for Food, Nutrition, and Health, Department of Biochemistry and Microbiology, Rutgers University, New Brunswick, NJ, USA.
Alexei KorennykhDepartment of Molecular Biology, Princeton University, Princeton, NJ, USA.
Mohamed S DoniaDepartment of Molecular Biology, Princeton University, Princeton, NJ, USA. donia@princeton.edu.ORCID http://orcid.org/0000-0002-9604-2912
Princeton University · USRutgers, The State University of New Jersey · US

Funding

Translational Research Support CoreP30ES005022 · NIEHS · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI Emily S Barrett · 1988 to 2026
$47.4M
PREDOCTORAL TRAINING PROGRAM IN GENETICST32GM007388 · NIGMS · PRINCETON UNIVERSITY · PI CRISTEA, ILEANA M. · 1985 to 2022
$27.4M
Life Science and Biomedical technology Research center at NSLS-II LSBRP41GM111244 · NIGMS · BROOKHAVEN SCIENCE ASSOC-BROOKHAVEN LAB · PI MCSWEENEY, SEAN · 2014 to 2018
$16.4M
Structure and Function of Kinase Family Receptors Regulating TranslationR01GM110161 · NIGMS · PRINCETON UNIVERSITY · PI KORENNYKH, ALEXEI · 2014 to 2022
$2.5M
Uncultivated bacterial symbionts of humans: an untapped resource for drug discoveryDP2AI124441 · NIAID · PRINCETON UNIVERSITY · PI ABOU DONIA, MOHAMED · 2015 to 2015
$2.4M
NIAID NIH HHS DP2 AI124441NIEHS NIH HHS P30 ES005022NIGMS NIH HHS P41 GM111244NIGMS NIH HHS R01 GM110161NIGMS NIH HHS T32 GM007388Wellcome Trust 1013579
6 · The paper itself

Abstract

The human microbiome encodes a large repertoire of biochemical enzymes and pathways, most of which remain uncharacterized. Here, using a metagenomics-based search strategy, we discovered that bacterial members of the human gut and oral microbiome encode enzymes that selectively phosphorylate a clinically used antidiabetic drug, acarbose

Indexed as

Inactivation, MetabolicAcarboseAmylasesAnimalsDrug Resistance, BacterialGastrointestinal MicrobiomeHumansHypoglycemic AgentsMetagenomeModels, MolecularMouthPhosphotransferases (Alcohol Group Acceptor)Acarboseacarbose 7-phosphotransferaseAmylasesHypoglycemic AgentsPhosphotransferases (Alcohol Group Acceptor)

Identifiers

PMID34819672
PMCPMC10258454
OpenAlexW3217590704

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.