Evidence map›Paper›PMID 34817649›Full record

ArticleArchives of virology2022

Possible relationship between IL28B rs12979860 and TLR2 -196 to -174 del/ins polymorphisms and the liver fibrosis stage in hepatitis C patients.

Zehra Öksüz, Enver Üçbilek, Mehmet Sami Serin, Serkan Yaraş, Gülhan Örekici Temel, Orhan Sezgin

Abstract read
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In one paragraph

Article in Archives of virology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed, 1 pooled it
0.2field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 synthesis or guideline pooled it, 2 citations in OpenAlex.

  1. Pooled it
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Zehra ÖksüzDepartment of Pharmaceutical Microbiology, Mersin University Faculty of Pharmacy, Mersin, Turkey. zehraoksz@gmail.com.ORCID http://orcid.org/0000-0002-1542-0556
Enver ÜçbilekDepartment of Gastroenterology, Mersin University Faculty of Medicine, Mersin, Turkey.ORCID http://orcid.org/0000-0002-2935-5580
Mehmet Sami SerinDepartment of Pharmaceutical Microbiology, Mersin University Faculty of Pharmacy, Mersin, Turkey.ORCID http://orcid.org/0000-0002-5113-5509
Serkan YaraşDepartment of Gastroenterology, Mersin University Faculty of Medicine, Mersin, Turkey.ORCID http://orcid.org/0000-0003-1404-7515
Gülhan Örekici TemelDepartment of Biostatistics, Mersin University Faculty of Medicine, Mersin, Turkey.ORCID http://orcid.org/0000-0002-2835-6979
Orhan SezginDepartment of Gastroenterology, Mersin University Faculty of Medicine, Mersin, Turkey.ORCID http://orcid.org/0000-0002-6704-4716
Mersin Üniversitesi · TR

Funding

Türkiye Bilimsel ve Teknolojik Araştirma Kurumu 218S809
6 · The paper itself

Abstract

It has been shown that host factors play an important role in the progression of hepatitis C virus (HCV) infection. Toll-like receptor 2 (TLR2) del and interleukin 28B (IL28B) T alleles can mediate liver inflammation and pathogenesis of hepatocellular carcinoma. In the present study, the possible relationship between the IL28B rs12979860 C/T and TLR2 -196 to -174 del/ins gene variants and different fibrosis stages and host factors in hepatitis C patients was investigated. IL28B and TLR2 polymorphisms in the blood of 50 hepatitis C patients at different stages of fibrosis (24 mild/moderate, 26 advanced) and 24 healthy controls were examined by RT-qPCR. The highest frequency of the TLR2 del (26.9%) and IL28B T (46.2%) alleles was found in hepatitis C patients with the most advanced fibrosis, and the lowest frequency was found in healthy controls. There was a statistically significant difference between hepatitis C patients with advanced fibrosis and healthy controls in terms of the TLR2 del (p = 0.0062) and IL28B T (p = 0.0017) allele frequencies. However, no statistically significant difference was found between the mild/moderate fibrosis and severe fibrosis patient groups in terms of genotype or IL28B and TLR2 polymorphisms (p > 0.05). In addition, there was a significant difference between patients with mild/moderate or advanced fibrosis who carried the TLR2 del allele together with the IL28B CT genotype and healthy controls. The present study emphasizes that the TLR2 and IL28B gene variants cannot be single biomarkers for the determination of fibrosis stage in hepatitis C infection but together can play an important role in predicting severe disease.

Indexed as

Hepatitis CLiver CirrhosisToll-Like Receptor 2GenotypeHumansInterferon LambdaInterferonsInterleukinsPolymorphism, Single NucleotideInterferon Lambdainterferon-lambda, humanInterferonsInterleukinsTLR2 protein, humanToll-Like Receptor 2

Identifiers

PMID34817649
OpenAlexW3214923282

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.