Evidence map›Paper›PMID 34817648›Full record

ArticlePlanta2021

Seed-derived defensins from Scots pine: structural and functional features.

Yulia I Shalovylo, Yurii M Yusypovych, Nataliya I Hrunyk, Ivan I Roman, Volodymyr K Zaika, Hryhoriy T Krynytskyy, Irina V Nesmelova, Valentina A Kovaleva

Abstract read
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In one paragraph

Article in Planta, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
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  6. Review
  7. The future of recombinant host defense peptides.Microbial cell factories · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Yulia I ShalovyloUkrainian National Forestry University, 103, Gen. Chuprynka, St., Lviv, 79057, Ukraine.
Yurii M YusypovychUkrainian National Forestry University, 103, Gen. Chuprynka, St., Lviv, 79057, Ukraine.
Nataliya I HrunykUkrainian National Forestry University, 103, Gen. Chuprynka, St., Lviv, 79057, Ukraine.
Ivan I RomanIvan Franko National University of Lviv, 1, Saksagansky St., Lviv, 79005, Ukraine.
Volodymyr K ZaikaUkrainian National Forestry University, 103, Gen. Chuprynka, St., Lviv, 79057, Ukraine.
Hryhoriy T KrynytskyyUkrainian National Forestry University, 103, Gen. Chuprynka, St., Lviv, 79057, Ukraine.
Irina V NesmelovaUniversity of North Carolina at Charlotte, 9201 University City Blvd., Charlotte, 28223, USA.
Valentina A KovalevaUkrainian National Forestry University, 103, Gen. Chuprynka, St., Lviv, 79057, Ukraine. kovaleva@nltu.edu.ua.ORCID http://orcid.org/0000-0002-3099-2747
Ukrainian National Forestry University · UALviv University · UAUniversity of North Carolina at Charlotte · US

Funding

crdf global FSA-19-65490-0crdf global FSA-19-65490-1ministry of education and science of ukraine M52-2020
6 · The paper itself

Abstract

MAIN

conclusionThe recombinant PsDef5.1 defensin inhibits the growth of phytopathogenic fungi, Gram-positive and Gram-negative bacteria, and human pathogen Candida albicans. Expression of seed-derived Scots pine defensins is tissue-specific and developmentally regulated. Plant defensins are ubiquitous antimicrobial peptides that possess a broad spectrum of activities and multi-functionality. The genes for these antimicrobial proteins form a multigenic family in the plant genome and are expressed in every organ. Most of the known defensins have been isolated from seeds of various monocot and dicot species, but seed-derived defensins have not yet been characterized in gymnosperms. This study presents the isolation of two new 249 bp cDNA sequences from Scots pine seeds with 97.9% nucleotide homology named PsDef5.1 and PsDef5.2. Their deduced amino acid sequences have typical plant defensin features, including an endoplasmic reticulum signal sequence of 31 amino acids (aa), followed by a characteristic defensin domain of 51 aa. To elucidate the functional activity of new defensins, we expressed the mature form of PsDef5.1 in a prokaryotic system. The purified recombinant peptide exhibited activity against the phytopathogenic fungi and Gram-negative and Gram-positive bacteria with the IC

Indexed as

Anti-Bacterial AgentsDefensinsCandida albicansGram-Negative BacteriaGram-Positive BacteriaSeedsAnti-Bacterial AgentsDefensinsAntifungal and antibacterial activitiesAntimicrobial peptideCloningExpression patternHeterological expressionPinus sylvestris L.

Identifiers

PMID34817648
OpenAlexW3217235513

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.