Evidence map›Paper›PMID 34817548›Full record

ArticleThe Journal of experimental medicine2022

Blood stem cell PU.1 upregulation is a consequence of differentiation without fast autoregulation.

Nouraiz Ahmed, Martin Etzrodt, Philip Dettinger, Tobias Kull, Dirk Loeffler, Philipp S Hoppe, James S Chavez, Yang Zhang, Germán Camargo Ortega, Oliver Hilsenbeck and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 3 countries.

Nouraiz AhmedDepartment of Biosystems Science & Engineering, Eidgenössische Technische Hochschule Zürich, Basel, Switzerland.ORCID 0000-0003-1815-4481
Martin EtzrodtDepartment of Biosystems Science & Engineering, Eidgenössische Technische Hochschule Zürich, Basel, Switzerland.ORCID 0000-0003-1928-3904
Philip DettingerDepartment of Biosystems Science & Engineering, Eidgenössische Technische Hochschule Zürich, Basel, Switzerland.ORCID 0000-0001-8032-781X
Tobias KullDepartment of Biosystems Science & Engineering, Eidgenössische Technische Hochschule Zürich, Basel, Switzerland.ORCID 0000-0001-8002-0519
Dirk LoefflerDepartment of Biosystems Science & Engineering, Eidgenössische Technische Hochschule Zürich, Basel, Switzerland.ORCID 0000-0001-9870-0088
Philipp S HoppeDepartment of Biosystems Science & Engineering, Eidgenössische Technische Hochschule Zürich, Basel, Switzerland.ORCID 0000-0001-6521-7401
James S ChavezDivision of Hematology, Department of Medicine, University of Colorado Anschutz Medical Campus, Aurora, CO.ORCID 0000-0002-7090-9055
Yang ZhangDepartment of Biosystems Science & Engineering, Eidgenössische Technische Hochschule Zürich, Basel, Switzerland.ORCID 0000-0002-1763-6908
Germán Camargo OrtegaDepartment of Biosystems Science & Engineering, Eidgenössische Technische Hochschule Zürich, Basel, Switzerland.ORCID 0000-0002-4305-2578
Oliver HilsenbeckDepartment of Biosystems Science & Engineering, Eidgenössische Technische Hochschule Zürich, Basel, Switzerland.ORCID 0000-0002-9271-8815
Hideaki NakajimaDepartment of Stem Cell and Immune Regulation, Yokohama City University Graduate School of Medicine, Yokohama, Japan.ORCID 0000-0002-8967-4954
Eric M PietrasDivision of Hematology, Department of Medicine, University of Colorado Anschutz Medical Campus, Aurora, CO.ORCID 0000-0002-7339-8828
Timm SchroederDepartment of Biosystems Science & Engineering, Eidgenössische Technische Hochschule Zürich, Basel, Switzerland.ORCID 0000-0001-9320-0252
Board of the Swiss Federal Institutes of Technology · CHUniversity of Colorado Anschutz Medical Campus · USYokohama City University · JP

Funding

Impact of IL-1 signaling on hematopoietic stem cell function and emergence of clonal hematopoiesis.R01DK119394 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI PIETRAS, ERIC M · 2019 to 2023
$2.0M
NIDDK NIH HHS R01 DK119394Swiss National Science Foundation 179490
6 · The paper itself

Abstract

Transcription factors (TFs) regulate cell fates, and their expression must be tightly regulated. Autoregulation is assumed to regulate many TFs' own expression to control cell fates. Here, we manipulate and quantify the (auto)regulation of PU.1, a TF controlling hematopoietic stem and progenitor cells (HSPCs), and correlate it to their future fates. We generate transgenic mice allowing both inducible activation of PU.1 and noninvasive quantification of endogenous PU.1 protein expression. The quantified HSPC PU.1 dynamics show that PU.1 up-regulation occurs as a consequence of hematopoietic differentiation independently of direct fast autoregulation. In contrast, inflammatory signaling induces fast PU.1 up-regulation, which does not require PU.1 expression or its binding to its own autoregulatory enhancer. However, the increased PU.1 levels induced by inflammatory signaling cannot be sustained via autoregulation after removal of the signaling stimulus. We conclude that PU.1 overexpression induces HSC differentiation before PU.1 up-regulation, only later generating cell types with intrinsically higher PU.1.

Indexed as

AnimalsCell DifferentiationCells, CulturedGene ExpressionHematopoietic Stem CellsHomeostasisMaleMiceMice, Inbred C57BLMice, TransgenicMicroscopy, FluorescenceProto-Oncogene ProteinsProto-Oncogene Protein Spi-1Reverse Transcriptase Polymerase Chain ReactionSignal TransductionTime-Lapse ImagingProto-Oncogene ProteinsProto-Oncogene Protein Spi-1Trans-Activators

Identifiers

PMID34817548
PMCPMC8624737
OpenAlexW3215312371

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.