Evidence map›Paper›PMID 34815418›Full record

ArticleNature communications2021

Identification of disease-linked hyperactivating mutations in UBE3A through large-scale functional variant analysis.

Kellan P Weston, Xiaoyi Gao, Jinghan Zhao, Kwang-Soo Kim, Susan E Maloney, Jill Gotoff, Sumit Parikh, Yen-Chen Leu, Kuen-Phon Wu, Marwan Shinawi and 3 more

Abstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. The gain-of-function UBE3AScientific reports · 2025
    Article
  9. Unraveling the Roles of UBE3A in Neurodevelopment and Neurodegeneration.International journal of molecular sciences · 2025
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Structural and Pathogenic Impacts ofInternational journal of molecular sciences · 2023
    Article
  19. Stem cell models of Angelman syndrome.Frontiers in cell and developmental biology · 2023
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Kellan P Weston *Department of Neuroscience, Washington University School of Medicine, St. Louis, MO, 63110, USA.
Xiaoyi Gao *Department of Neuroscience, Washington University School of Medicine, St. Louis, MO, 63110, USA.
Jinghan ZhaoDepartment of Neuroscience, Washington University School of Medicine, St. Louis, MO, 63110, USA.ORCID http://orcid.org/0000-0002-2420-8717
Kwang-Soo KimDepartment of Neuroscience, Washington University School of Medicine, St. Louis, MO, 63110, USA.
Susan E MaloneyDepartment of Psychiatry, Washington University School of Medicine, St. Louis, MO, 63110, USA.
Jill GotoffDepartment of Pediatrics, Geisinger Medical Center, Danville, PA, 17822, USA.
Sumit ParikhDepartment of Neurogenetics, Neurosciences Institute, Cleveland Clinic, Cleveland, OH, 44106, USA.
Yen-Chen LeuInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan.
Kuen-Phon WuInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan.ORCID http://orcid.org/0000-0002-1525-6004
Marwan ShinawiDivision of Genetics and Genomic Medicine, Department of Pediatrics, St. Louis Children's Hospital, Washington University School of Medicine, St. Louis, MO, 63110, USA.ORCID http://orcid.org/0000-0003-1329-4100
Joshua P SteimelDeparment of Mechanical Engineering, University of the Pacific, Stockton, CA, 95211, USA.
Joseph S HarrisonDepartment of Chemistry, University of the Pacific, Stockton, CA, 95211, USA.
Jason J YiDepartment of Neuroscience, Washington University School of Medicine, St. Louis, MO, 63110, USA. jasonyi@wustl.edu.ORCID http://orcid.org/0000-0001-9648-9899

Funding

WUIDDRC Supplement-Supporting the health and well-being of children with intellectual and developmental disability during COVID-19 pandemicP50HD103525 · NICHD · WASHINGTON UNIVERSITY · PI JOSEPH D DOUGHERTY, Natasha Marrus · 2020 to 2026
$15.5M
Understanding the mechanisms of UBE3A regulation in neuronal developmentR01MH122786 · NIMH · WASHINGTON UNIVERSITY · PI YI, JASON J · 2021 to 2025
$2.0M
NICHD NIH HHS P50 HD103525NIMH NIH HHS R01 MH122786
6 · The paper itself

Abstract

The mechanisms that underlie the extensive phenotypic diversity in genetic disorders are poorly understood. Here, we develop a large-scale assay to characterize the functional valence (gain or loss-of-function) of missense variants identified in UBE3A, the gene whose loss-of-function causes the neurodevelopmental disorder Angelman syndrome. We identify numerous gain-of-function variants including a hyperactivating Q588E mutation that strikingly increases UBE3A activity above wild-type UBE3A levels. Mice carrying the Q588E mutation exhibit aberrant early-life motor and communication deficits, and individuals possessing hyperactivating UBE3A variants exhibit affected phenotypes that are distinguishable from Angelman syndrome. Additional structure-function analysis reveals that Q588 forms a regulatory site in UBE3A that is conserved among HECT domain ubiquitin ligases and perturbed in various neurodevelopmental disorders. Together, our study indicates that excessive UBE3A activity increases the risk for neurodevelopmental pathology and suggests that functional variant analysis can help delineate mechanistic subtypes in monogenic disorders.

Indexed as

Angelman SyndromeAnimalsDisease Models, AnimalEnzyme AssaysGain of Function MutationHEK293 CellsHumansLoss of Function MutationMiceMice, TransgenicMutation, MissenseNeurodevelopmental DisordersPhenotypeProtein IsoformsStructure-Activity RelationshipUbiquitin-Protein LigasesProtein IsoformsUBE3A protein, humanUbe3a protein, mouseUbiquitin-Protein Ligases

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.