Evidence map›Paper›PMID 34808842›Full record

ArticleOptics express2021

Single-photon peak event detection (SPEED): a computational method for fast photon counting in fluorescence lifetime imaging microscopy.

Janet E Sorrells, Rishyashring R Iyer, Lingxiao Yang, Eric J Chaney, Marina Marjanovic, Haohua Tu, Stephen A Boppart

Abstract read
In one paragraph

Article in Optics express, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Artificial Intelligence in Label-Free Optical Imaging Applications.Methods in molecular biology (Clifton, N.J.) · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Janet E Sorrells
Rishyashring R Iyer
Lingxiao Yang
Eric J Chaney
Marina Marjanovic
Haohua Tu
Stephen A Boppart

Funding

Fiber-Delivered Programmable Supercontinuum Laser Adaptive to EvolvingNeurophotonic Research R43MH119979 · NIMH · LIVEBX, LLC · PI DURACK, MATTHEW, LLANO, DANIEL A · 2019 to 2020
$878k
Correlative nonvital standard histopathology and vital multiphoton prehistopathologyR41GM139528 · NIGMS · LIVEBX, LLC · PI TU, HAOHUA · 2020 to 2020
$156k
NIGMS NIH HHS R41 GM139528NIMH NIH HHS R43 MH119979
6 · The paper itself

Abstract

Fluorescence lifetime imaging microscopy (FLIM) characterizes samples by examining the temporal properties of fluorescence emission, providing useful contrast within samples based on the local physical and biochemical environment of fluorophores. Despite this, FLIM applications have been limited in scope by either poor accuracy or long acquisition times. Here, we present a method for computational single-photon counting of directly sampled time-domain FLIM data that is capable of accurate fluorescence lifetime and intensity measurements while acquiring over 160 Mega-counts-per-second with sub-nanosecond time resolution between consecutive photon counts. We demonstrate that our novel method of Single-photon PEak Event Detection (SPEED) is more accurate than direct pulse sampling and faster than established photon counting FLIM methods. We further show that SPEED can be implemented for imaging and quantifying samples that benefit from higher -throughput and -dynamic range imaging with real-time GPU-accelerated processing and use this capability to examine the NAD(P)H-related metabolic dynamics of apoptosis in human breast cancer cells. Computational methods for photon counting such as SPEED open up more opportunities for fast and accurate FLIM imaging and additionally provide a basis for future innovation into alternative FLIM techniques.

Indexed as

FluorescencePhotonsAlgorithmsAnimalsApoptosisBreast NeoplasmsCell Line, TumorFemaleFluoresceinFluorescent DyesHumansImage Processing, Computer-AssistedMicroscopy, FluorescenceModels, AnimalNADPRadiometryFluoresceinFluorescent DyesNADPrhodamine BRhodamines

Identifiers

PMID34808842
PMCPMC8687103

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.