Evidence map›Paper›PMID 34807377›Full record

ArticleMolecular biology reports2022

Sequence, structural and functional conservation among the human and fission yeast ELL and EAF transcription elongation factors.

Kumari Sweta, Preeti Dabas, Nimisha Sharma

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Article in Molecular biology reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.4field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

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5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Kumari Sweta *University School of Biotechnology, G.G.S. Indraprastha University, Sector 16C, Dwarka, New Delhi, 110078, India.
Preeti Dabas *University School of Biotechnology, G.G.S. Indraprastha University, Sector 16C, Dwarka, New Delhi, 110078, India.
Nimisha SharmaUniversity School of Biotechnology, G.G.S. Indraprastha University, Sector 16C, Dwarka, New Delhi, 110078, India. nimisha@ipu.ac.in.ORCID http://orcid.org/0000-0001-9245-6862
Guru Gobind Singh Indraprastha University · IN

Funding

department of biotechnology , ministry of science and technology BT/PR12568/BRB/10/1369/2015
6 · The paper itself

Abstract

backgroundTranscription elongation is a dynamic and tightly regulated step of gene expression in eukaryotic cells. Eleven nineteen Lysine rich Leukemia (ELL) and ELL Associated Factors (EAF) family of conserved proteins are required for efficient RNA polymerase II-mediated transcription elongation. Orthologs of these proteins have been identified in different organisms, including fission yeast and humans. METHODS AND

resultsIn the present study, we have examined the sequence, structural and functional conservation between the fission yeast and human ELL and EAF orthologs. Our computational analysis revealed that these proteins share some sequence characteristics, and were predominantly disordered in both organisms. Our functional complementation assays revealed that both human ELL and EAF proteins could complement the lack of ell1

conclusionsCollectively, our work adds ELL-EAF to the increasing list of human-yeast complementation gene pairs, wherein the simpler fission yeast can be used to further enhance our understanding of the role of these proteins in transcription elongation and human disease.

Indexed as

Amino Acid SequenceHumansPeptide Elongation FactorsRNA Polymerase IISchizosaccharomycesSchizosaccharomyces pombe ProteinsSequence HomologyTranscriptional Elongation FactorsTranscription FactorsTranscription, GeneticEAF1 protein, humaneaf1 protein, S pombeell1 protein, S pombeELL protein, humanPeptide Elongation FactorsRNA Polymerase IISchizosaccharomyces pombe ProteinsTranscriptional Elongation FactorsTranscription FactorsEAFELLGene regulationRNA polymerase IITranscription

Identifiers

PMID34807377
OpenAlexW3217053923

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.