Evidence map›Paper›PMID 34806773›Full record

ArticleThe EMBO journal2022

Postnatal expression of the lysine methyltransferase SETD1B is essential for learning and the regulation of neuron-enriched genes.

Alexandra Michurina, M Sadman Sakib, Cemil Kerimoglu, Dennis Manfred Krüger, Lalit Kaurani, Md Rezaul Islam, Parth Devesh Joshi, Sophie Schröder, Tonatiuh Pena Centeno, Jiayin Zhou and 8 more

Open access · hybridAbstract read
In one paragraph

Article in The EMBO journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Ketogenic Diet as an Epigenetic Therapy in SETD1B-Related Epilepsy.Annals of clinical and translational neurology · 2026
    Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. lncRNAbioRxiv : the preprint server for biology · 2025
    Article
  8. Article
  9. Article
  10. [Clinical characteristics of epilepsy with intellectual disability associated withZhongguo dang dai er ke za zhi = Chinese journal of contemporary pediatrics · 2025
    Review
  11. Article
  12. Article
  13. LncRNANon-coding RNA · 2025
    Article
  14. Article
  15. Review
  16. Article
  17. Review
  18. Review
  19. Conserved reduction of mProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 4 institutions in 1 country.

Alexandra MichurinaDepartment for Systems Medicine and Epigenetics, German Center for Neurodegenerative Diseases (DZNE), Göttingen, Germany.
M Sadman SakibDepartment for Systems Medicine and Epigenetics, German Center for Neurodegenerative Diseases (DZNE), Göttingen, Germany.
Cemil KerimogluDepartment for Systems Medicine and Epigenetics, German Center for Neurodegenerative Diseases (DZNE), Göttingen, Germany.ORCID 0000-0001-6523-5925
Dennis Manfred KrügerDepartment for Systems Medicine and Epigenetics, German Center for Neurodegenerative Diseases (DZNE), Göttingen, Germany.
Lalit KauraniDepartment for Systems Medicine and Epigenetics, German Center for Neurodegenerative Diseases (DZNE), Göttingen, Germany.
Md Rezaul IslamDepartment for Systems Medicine and Epigenetics, German Center for Neurodegenerative Diseases (DZNE), Göttingen, Germany.
Parth Devesh JoshiDepartment for Gene and Behavior, Max Planck Institute for Biophysical Chemistry, Göttingen, Germany.
Sophie SchröderDepartment for Systems Medicine and Epigenetics, German Center for Neurodegenerative Diseases (DZNE), Göttingen, Germany.
Tonatiuh Pena CentenoDepartment for Systems Medicine and Epigenetics, German Center for Neurodegenerative Diseases (DZNE), Göttingen, Germany.ORCID 0000-0002-9329-8912
Jiayin ZhouDepartment for Systems Medicine and Epigenetics, German Center for Neurodegenerative Diseases (DZNE), Göttingen, Germany.
Ranjit PradhanDepartment for Systems Medicine and Epigenetics, German Center for Neurodegenerative Diseases (DZNE), Göttingen, Germany.
Julia ChaDepartment for Systems Medicine and Epigenetics, German Center for Neurodegenerative Diseases (DZNE), Göttingen, Germany.
Xingbo XuDepartment of Cardiology and Pneumology, University Medical Center of Göttingen, Georg-August University, Göttingen, Germany.
Gregor EicheleDepartment for Gene and Behavior, Max Planck Institute for Biophysical Chemistry, Göttingen, Germany.ORCID 0000-0002-2863-9127
Elisabeth M ZeisbergDepartment of Cardiology and Pneumology, University Medical Center of Göttingen, Georg-August University, Göttingen, Germany.
Andrea KranzBiotechnology Center, Center for Molecular and Cellular Bioengineering, Dresden University of Technology, Dresden, Germany.ORCID 0000-0002-7481-0220
A Francis StewartBiotechnology Center, Center for Molecular and Cellular Bioengineering, Dresden University of Technology, Dresden, Germany.ORCID 0000-0002-4754-1707
André FischerDepartment for Systems Medicine and Epigenetics, German Center for Neurodegenerative Diseases (DZNE), Göttingen, Germany.ORCID 0000-0001-8546-1161
German Center for Neurodegenerative Diseases · DEGerman Centre for Cardiovascular Research · DEMax Planck Institute for Biophysical Chemistry · DEMax Planck Institut für Zellbiologie · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In mammals, histone 3 lysine 4 methylation (H3K4me) is mediated by six different lysine methyltransferases. Among these enzymes, SETD1B (SET domain containing 1b) has been linked to syndromic intellectual disability in human subjects, but its role in the mammalian postnatal brain has not been studied yet. Here, we employ mice deficient for Setd1b in excitatory neurons of the postnatal forebrain, and combine neuron-specific ChIP-seq and RNA-seq approaches to elucidate its role in neuronal gene expression. We observe that Setd1b controls the expression of a set of genes with a broad H3K4me3 peak at their promoters, enriched for neuron-specific genes linked to learning and memory function. Comparative analyses in mice with conditional deletion of Kmt2a and Kmt2b histone methyltransferases show that SETD1B plays a more pronounced and potent role in regulating such genes. Moreover, postnatal loss of Setd1b leads to severe learning impairment, suggesting that SETD1B-dependent regulation of H3K4me levels in postnatal neurons is critical for cognitive function.

Indexed as

Gene Expression RegulationAnimalsAnimals, NewbornCalcium-Calmodulin-Dependent Protein Kinase Type 2Cell NucleusEpigenesis, GeneticHippocampusHistone-Lysine N-MethyltransferaseHistonesIntegrasesLearningMemoryMiceMice, Inbred C57BLMice, KnockoutMyeloid-Lymphoid Leukemia ProteinCalcium-Calmodulin-Dependent Protein Kinase Type 2Cre recombinasehistone H3 trimethyl Lys4Histone-Lysine N-MethyltransferaseHistonesIntegrasesKmt2a protein, mouseKmt2d protein, mouseMyeloid-Lymphoid Leukemia ProteinSetd1b protein, mouseChIP-seqcognitive diseaseshistone-methylationlearning and memory

Identifiers

PMID34806773
PMCPMC8724770
OpenAlexW3217651307

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.