ArticleIUCrJ2021
Observation of substrate diffusion and ligand binding in enzyme crystals using high-repetition-rate mix-and-inject serial crystallography.
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Article in IUCrJ, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.
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53 citing papers in PubMed, 82 citations in OpenAlex.
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- Real-time capture of domain movements during copper amine oxidase catalysis by mix-and-inject serial crystallography.Nature communications · 2025Article
- Sensitive detection of structural dynamics using a statistical framework for comparative crystallography.Science advances · 2025Article
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- Innovative Strategies in X-ray Crystallography for Exploring Structural Dynamics and Reaction Mechanisms in Metabolic Disorders.Journal of personalized medicine · 2024Review
- A snapshot love story: what serial crystallography has done and will do for us.Acta crystallographica. Section D, Structural biology · 2024Review
- Scaling and Merging Time-Resolved Laue Data with Variational Inference.bioRxiv : the preprint server for biology · 2024Article
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Authors and funding
40 authors at 11 institutions in 4 countries.
Suraj PandeyPhysics Department, University of Wisconsin-Milwaukee, 3135 North Maryland Avenue, Milwaukee, WI 53211, USA.
George CalveySchool of Applied and Engineering Physics, Cornell University, 254 Clark Hall, Ithaca, NY 14853, USA.
Andrea M KatzSchool of Applied and Engineering Physics, Cornell University, 254 Clark Hall, Ithaca, NY 14853, USA.
Tek Narsingh MallaPhysics Department, University of Wisconsin-Milwaukee, 3135 North Maryland Avenue, Milwaukee, WI 53211, USA.
Faisal H M KouaCenter for Free-Electron Laser Science, Deutsches Elektronen-Synchrotron DESY, Notkestrasse 85, 22607 Hamburg, Germany.ORCID https://orcid.org/0000-0001-8371-9587
Jose M Martin-GarciaSchool of Molecular Sciences and Biodesign Center for Applied Structural Discovery, Arizona State University, Tempe, AZ 85287-1604, USA.
Ishwor PoudyalPhysics Department, University of Wisconsin-Milwaukee, 3135 North Maryland Avenue, Milwaukee, WI 53211, USA.
Jay-How YangSchool of Molecular Sciences and Biodesign Center for Applied Structural Discovery, Arizona State University, Tempe, AZ 85287-1604, USA.
Mohammad VakiliEuropean XFEL, Holzkoppel 4, 22869 Schenefeld, Germany.ORCID https://orcid.org/0000-0001-9776-0177
Oleksandr YefanovCenter for Free-Electron Laser Science, Deutsches Elektronen-Synchrotron DESY, Notkestrasse 85, 22607 Hamburg, Germany.ORCID https://orcid.org/0000-0001-8676-0091
Kara A ZielinskiSchool of Applied and Engineering Physics, Cornell University, 254 Clark Hall, Ithaca, NY 14853, USA.ORCID https://orcid.org/0000-0002-9907-5058
Sasa BajtDeutsches Elektronen-Synchrotron DESY, Notkestrasse 85, 22607 Hamburg, Germany.ORCID https://orcid.org/0000-0002-7163-7602
Salah AwelCenter for Free-Electron Laser Science, Deutsches Elektronen-Synchrotron DESY, Notkestrasse 85, 22607 Hamburg, Germany.ORCID https://orcid.org/0000-0002-9470-5911
Katarina DoernerEuropean XFEL, Holzkoppel 4, 22869 Schenefeld, Germany.
Matthias FrankLawrence Livermore National Laboratory, 7000 East Avenue, Livermore, CA 94550, USA.
Luca GelisioCenter for Free-Electron Laser Science, Deutsches Elektronen-Synchrotron DESY, Notkestrasse 85, 22607 Hamburg, Germany.
Rebecca JerniganSchool of Molecular Sciences and Biodesign Center for Applied Structural Discovery, Arizona State University, Tempe, AZ 85287-1604, USA.
Henry KirkwoodEuropean XFEL, Holzkoppel 4, 22869 Schenefeld, Germany.
Marco KloosEuropean XFEL, Holzkoppel 4, 22869 Schenefeld, Germany.
Jayanath KoliyaduEuropean XFEL, Holzkoppel 4, 22869 Schenefeld, Germany.
Valerio MarianiCenter for Free-Electron Laser Science, Deutsches Elektronen-Synchrotron DESY, Notkestrasse 85, 22607 Hamburg, Germany.
Mitchell D MillerDepartment of BioSciences, Rice University, 6100 Main Street, Houston, TX 77005, USA.
Grant MillsEuropean XFEL, Holzkoppel 4, 22869 Schenefeld, Germany.
Garrett NelsonDepartment of Physics, Arizona State University, Tempe, AZ 85287, USA.
Jose L OlmosDepartment of BioSciences, Rice University, 6100 Main Street, Houston, TX 77005, USA.
Alireza SadriCenter for Free-Electron Laser Science, Deutsches Elektronen-Synchrotron DESY, Notkestrasse 85, 22607 Hamburg, Germany.
Tokushi SatoEuropean XFEL, Holzkoppel 4, 22869 Schenefeld, Germany.
Alexandra TolstikovaCenter for Free-Electron Laser Science, Deutsches Elektronen-Synchrotron DESY, Notkestrasse 85, 22607 Hamburg, Germany.
Weijun XuDepartment of BioSciences, Rice University, 6100 Main Street, Houston, TX 77005, USA.
Abbas OurmazdPhysics Department, University of Wisconsin-Milwaukee, 3135 North Maryland Avenue, Milwaukee, WI 53211, USA.
John C H SpenceDepartment of Physics, Arizona State University, Tempe, AZ 85287, USA.
Peter SchwanderPhysics Department, University of Wisconsin-Milwaukee, 3135 North Maryland Avenue, Milwaukee, WI 53211, USA.
Anton BartyDeutsches Elektronen-Synchrotron DESY, Notkestrasse 85, 22607 Hamburg, Germany.
Henry N ChapmanCenter for Free-Electron Laser Science, Deutsches Elektronen-Synchrotron DESY, Notkestrasse 85, 22607 Hamburg, Germany.
Petra FrommeSchool of Molecular Sciences and Biodesign Center for Applied Structural Discovery, Arizona State University, Tempe, AZ 85287-1604, USA.
Adrian P MancusoEuropean XFEL, Holzkoppel 4, 22869 Schenefeld, Germany.
George N PhillipsDepartment of BioSciences, Rice University, 6100 Main Street, Houston, TX 77005, USA.
Richard BeanEuropean XFEL, Holzkoppel 4, 22869 Schenefeld, Germany.
Lois PollackSchool of Applied and Engineering Physics, Cornell University, 254 Clark Hall, Ithaca, NY 14853, USA.
Marius SchmidtPhysics Department, University of Wisconsin-Milwaukee, 3135 North Maryland Avenue, Milwaukee, WI 53211, USA.ORCID https://orcid.org/0000-0002-0962-9468
European X-Ray Free-Electron Laser · DEUniversität Hamburg · DEUniversity of Wisconsin–Milwaukee · USArizona State University · USCornell University · USRice University · USDeutsches Elektronen-Synchrotron DESY · DEConsejo Superior de Investigaciones Científicas · ESLa Trobe University · AULawrence Livermore National Laboratory · USUniversity of California, San Francisco · US
Funding
TRAINING IN MOLECULAR PHYSICS OF BIOLOGICAL SYSTEMST32GM008267 · NIGMS · CORNELL UNIVERSITY ITHACA · PI WANG, MICHELLE D. · 1988 to 2021
$9.6MTechnology development for biological imaging with x-ray free electron lasersR01GM117342 · NIGMS · LAWRENCE LIVERMORE NATIONAL SECURITY, LLC · PI FRANK, MATTHIAS · 2016 to 2024
$4.8MFemtosecond nano-crystallography of membrane proteinsR01GM095583 · NIGMS · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI FROMME, PETRA · 2010 to 2023
$4.3MNIGMS NIH HHS R01 GM095583NIGMS NIH HHS R01 GM117342NIGMS NIH HHS T32 GM008267
Abstract
Here, we illustrate what happens inside the catalytic cleft of an enzyme when substrate or ligand binds on single-millisecond timescales. The initial phase of the enzymatic cycle is observed with near-atomic resolution using the most advanced X-ray source currently available: the European XFEL (EuXFEL). The high repetition rate of the EuXFEL combined with our mix-and-inject technology enables the initial phase of ceftriaxone binding to the
Indexed as
antibiotic resistanceceftriaxonedrug discoveryenzyme kineticsenzyme mechanismsEuropean X-ray Free-Electron Laserirreversible inhibitionmegahertz pulse-repetition ratemix-and-inject serial crystallographyprotein structure determinationserial femtosecond crystallographysubstrate diffusion in crystalssulbactamX-ray crystallographyβ-lactamases
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