Evidence map›Paper›PMID 34801067›Full record

ArticleBiotechnology for biofuels2021

Overexpression of the rice BAHD acyltransferase AT10 increases xylan-bound p-coumarate and reduces lignin in Sorghum bicolor.

Yang Tian, Chien-Yuan Lin, Joon-Hyun Park, Chuan-Yin Wu, Ramu Kakumanu, Venkataramana R Pidatala, Khanh M Vuu, Alberto Rodriguez, Patrick M Shih, Edward E K Baidoo and 5 more

Open access · goldAbstract read
In one paragraph

Article in Biotechnology for biofuels, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Engineered reduction of S-adenosylmethionine alters lignin in sorghum.Biotechnology for biofuels and bioproducts · 2024
    Article
  5. Review
  6. Article
  7. Article
  8. Natural variation inFrontiers in plant science · 2023
    Article
  9. Article
  10. Review
  11. Article
  12. Engineering sorghum for higher 4-hydroxybenzoic acid content.Metabolic engineering communications · 2022
    Article
  13. Review
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 1 country.

Yang TianJoint BioEnergy Institute, Emeryville, CA, 94608, USA.
Chien-Yuan LinJoint BioEnergy Institute, Emeryville, CA, 94608, USA.
Joon-Hyun ParkForage Genetics International, West Salem, WI, 54669, USA.
Chuan-Yin WuForage Genetics International, West Salem, WI, 54669, USA.
Ramu KakumanuJoint BioEnergy Institute, Emeryville, CA, 94608, USA.
Venkataramana R PidatalaJoint BioEnergy Institute, Emeryville, CA, 94608, USA.
Khanh M VuuJoint BioEnergy Institute, Emeryville, CA, 94608, USA.
Alberto RodriguezJoint BioEnergy Institute, Emeryville, CA, 94608, USA.
Patrick M ShihJoint BioEnergy Institute, Emeryville, CA, 94608, USA.
Edward E K BaidooJoint BioEnergy Institute, Emeryville, CA, 94608, USA.
Stephen TempleForage Genetics International, West Salem, WI, 54669, USA.
Blake A SimmonsJoint BioEnergy Institute, Emeryville, CA, 94608, USA.
John M GladdenJoint BioEnergy Institute, Emeryville, CA, 94608, USA.
Henrik V SchellerJoint BioEnergy Institute, Emeryville, CA, 94608, USA.
Aymerick EudesJoint BioEnergy Institute, Emeryville, CA, 94608, USA. ageudes@lbl.gov.ORCID http://orcid.org/0000-0002-1387-6111
Lawrence Berkeley National Laboratory · USForage Genetics International · USSandia National Laboratories California · US

Funding

Office of Science DE-AC02-05CH11231
6 · The paper itself

Abstract

backgroundThe development of bioenergy crops with reduced recalcitrance to enzymatic degradation represents an important challenge to enable the sustainable production of advanced biofuels and bioproducts. Biomass recalcitrance is partly attributed to the complex structure of plant cell walls inside which cellulose microfibrils are protected by a network of hemicellulosic xylan chains that crosslink with each other or with lignin via ferulate (FA) bridges. Overexpression of the rice acyltransferase OsAT10 is an effective bioengineering strategy to lower the amount of FA involved in the formation of cell wall crosslinks and thereby reduce cell wall recalcitrance. The annual crop sorghum represents an attractive feedstock for bioenergy purposes considering its high biomass yields and low input requirements. Although we previously validated the OsAT10 engineering approach in the perennial bioenergy crop switchgrass, the effect of OsAT10 expression on biomass composition and digestibility in sorghum remains to be explored.

resultsWe obtained eight independent sorghum (Sorghum bicolor (L.) Moench) transgenic lines with a single copy of a construct designed for OsAT10 expression. Consistent with the proposed role of OsAT10 in acylating arabinosyl residues on xylan with p-coumarate (pCA), a higher amount of p-coumaroyl-arabinose was released from the cell walls of these lines upon hydrolysis with trifluoroacetic acid. However, no major changes were observed regarding the total amount of pCA or FA esters released from cell walls upon mild alkaline hydrolysis. Certain diferulate (diFA) isomers identified in alkaline hydrolysates were increased in some transgenic lines. The amount of the main cell wall monosaccharides glucose, xylose, and arabinose was unaffected. The transgenic lines showed reduced lignin content and their biomass released higher yields of sugars after ionic liquid pretreatment followed by enzymatic saccharification.

conclusionsExpression of OsAT10 in sorghum leads to an increase of xylan-bound pCA without reducing the overall content of cell wall FA esters. Nevertheless, the amount of total cell wall pCA remains unchanged indicating that most pCA is ester-linked to lignin. Unlike other engineered plants overexpressing OsAT10 or a phylogenetically related acyltransferase with similar putative function, the improvements of biomass saccharification efficiency in sorghum OsAT10 lines are likely the result of lignin reductions rather than reductions of cell wall-bound FA. These results also suggest a relationship between xylan-bound pCA and lignification in cell walls.

Indexed as

BioenergyDiferulatesFerulateLigninp-CoumarateSaccharificationSorghumXylan

Identifiers

PMID34801067
PMCPMC8606057
OpenAlexW3215075397

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.